KEGG   Musa acuminata (dessert banana): 103984086
Entry
103984086         CDS       T03447                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03082  ATP-dependent chromatin remodeling
mus03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103984086
   03083 Polycomb repressive complex
    103984086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mus03036]
    103984086
Enzymes [BR:mus01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103984086
Chromosome and associated proteins [BR:mus03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103984086
   HDAC complexes
    Sin3A-HDAC complex
     103984086
    BRAF-HDAC complex
     103984086
    REST complex
     103984086
    SHIP complex
     103984086
    MiDAC complex
     103984086
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103984086
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103984086
  Chromatin remodeling factors
   NuRD complex
    103984086
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103984086
NCBI-ProteinID: XP_009399782
UniProt: A0A804J1H0
LinkDB
Position
BXJ2-5:4601048..4607933
AA seq 517 aa
METGGGNSLPGVGQDATKRKVCYFYDPEIGNYYYGQGHPMKPHRIRMTHALLAHYGLLGN
LQVYKPNPARDRDLCRFHADDYVAFLRSISPETQQDQMRALKRFNVGEDCPVFDGLYPFC
QAYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDG
IDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPPHEYYEYFGPDYTLHVAPSNME
NKNSRQQLDEIRARLLDNLSKIRHAPSVQFQERPPDTEFPEQDEDQEDPDERHDPASDMD
VDGSKHPDETSRKPCSNNIQNVRIKKENMECEPKDQEAQKVGGDHAKVVEPMAEDVSGPK
ASDVSSMAIDEPGSVKAEQQDTQNKLSETPVFAHQKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggagactggtggagggaactcgcttccaggcgtgggccaggacgcgacgaagcggaag
gtgtgctacttctacgacccggaaatcgggaactactactacgggcagggacatccgatg
aagccccaccggattcggatgacgcatgcgttgctcgcccactacggcctcctgggcaac
ttgcaggtctacaagcctaatcccgcccgcgaccgcgacctctgccgcttccacgctgac
gactatgtcgccttcctccgttccattagcccggagacccagcaggaccagatgcgcgcc
ctcaagcgcttcaatgtcggcgaggactgccccgtcttcgatggcctttatcccttctgc
caggcctacgccggcggctccgttggcggcgccgtcaagctcaaccacggccacgacatc
gccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctccggattttgc
tacgtcaacgacatcgttctcgccatcctcgagctcctcaagtaccatgagcgtgtgcta
tatgtggacattgatatccatcatggagacggggtggaggaagccttctacacaactgac
agggtaatgacagtttcattccataagtttggagattactttcctggaacaggagacata
cgcgacattggatatgggaaaggaaaatattactctctgaatgttcctttagatgatgga
atagatgatgagagttatcaatctctcttcaaacccataatgggaaaagtgatggaagtt
tttcggcctggtgctgtggtacttcaatgtggtgctgattcattatctggggacaggttg
ggctgttttaacctttccatcagaggccatgcagagtgtgtgaaatatatgagatctttc
aatgtgccactattgttgctaggtggtggtggatatactatcaggaatgttgctcgctgt
tggtgctatgagacaggagttgcacttggagtagaagttgatgacaagatgcctccgcat
gaatattatgagtattttggtccagattatactctccatgttgcaccaagtaatatggag
aacaaaaattcacgacagcaattggatgagataagagcaaggcttctagataatctttca
aagattcgacatgctcctagtgtccaatttcaagaacggccacctgatacagagttccca
gagcaagatgaagatcaagaggacccagatgaaagacatgatccagcttctgatatggat
gtggatggttccaagcatccagatgagacttctcggaaaccttgttcaaataatatccag
aatgtgagaatcaagaaggaaaatatggaatgtgaaccaaaagatcaggaagctcagaaa
gttggtggagatcatgccaaagtcgtggaacccatggccgaggatgtctcaggccccaag
gcttcagatgttagttccatggccatagacgaacctgggagtgtgaaggccgagcagcag
gacactcaaaataagttgtctgaaacgcctgtatttgcacaccaaaaaccctga

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