Musa acuminata (dessert banana): 103984086
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Entry
103984086 CDS
T03447
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
mus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103984086
03083 Polycomb repressive complex
103984086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103984086
Enzymes [BR:
mus01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103984086
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103984086
HDAC complexes
Sin3A-HDAC complex
103984086
BRAF-HDAC complex
103984086
REST complex
103984086
SHIP complex
103984086
MiDAC complex
103984086
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103984086
Heterochromatin formation proteins
Other heterochromatin formation proteins
103984086
Chromatin remodeling factors
NuRD complex
103984086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
103984086
NCBI-ProteinID:
XP_009399782
UniProt:
A0A804J1H0
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Position
BXJ2-5:4601048..4607933
Genome browser
AA seq
517 aa
AA seq
DB search
METGGGNSLPGVGQDATKRKVCYFYDPEIGNYYYGQGHPMKPHRIRMTHALLAHYGLLGN
LQVYKPNPARDRDLCRFHADDYVAFLRSISPETQQDQMRALKRFNVGEDCPVFDGLYPFC
QAYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDG
IDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPPHEYYEYFGPDYTLHVAPSNME
NKNSRQQLDEIRARLLDNLSKIRHAPSVQFQERPPDTEFPEQDEDQEDPDERHDPASDMD
VDGSKHPDETSRKPCSNNIQNVRIKKENMECEPKDQEAQKVGGDHAKVVEPMAEDVSGPK
ASDVSSMAIDEPGSVKAEQQDTQNKLSETPVFAHQKP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggagactggtggagggaactcgcttccaggcgtgggccaggacgcgacgaagcggaag
gtgtgctacttctacgacccggaaatcgggaactactactacgggcagggacatccgatg
aagccccaccggattcggatgacgcatgcgttgctcgcccactacggcctcctgggcaac
ttgcaggtctacaagcctaatcccgcccgcgaccgcgacctctgccgcttccacgctgac
gactatgtcgccttcctccgttccattagcccggagacccagcaggaccagatgcgcgcc
ctcaagcgcttcaatgtcggcgaggactgccccgtcttcgatggcctttatcccttctgc
caggcctacgccggcggctccgttggcggcgccgtcaagctcaaccacggccacgacatc
gccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctccggattttgc
tacgtcaacgacatcgttctcgccatcctcgagctcctcaagtaccatgagcgtgtgcta
tatgtggacattgatatccatcatggagacggggtggaggaagccttctacacaactgac
agggtaatgacagtttcattccataagtttggagattactttcctggaacaggagacata
cgcgacattggatatgggaaaggaaaatattactctctgaatgttcctttagatgatgga
atagatgatgagagttatcaatctctcttcaaacccataatgggaaaagtgatggaagtt
tttcggcctggtgctgtggtacttcaatgtggtgctgattcattatctggggacaggttg
ggctgttttaacctttccatcagaggccatgcagagtgtgtgaaatatatgagatctttc
aatgtgccactattgttgctaggtggtggtggatatactatcaggaatgttgctcgctgt
tggtgctatgagacaggagttgcacttggagtagaagttgatgacaagatgcctccgcat
gaatattatgagtattttggtccagattatactctccatgttgcaccaagtaatatggag
aacaaaaattcacgacagcaattggatgagataagagcaaggcttctagataatctttca
aagattcgacatgctcctagtgtccaatttcaagaacggccacctgatacagagttccca
gagcaagatgaagatcaagaggacccagatgaaagacatgatccagcttctgatatggat
gtggatggttccaagcatccagatgagacttctcggaaaccttgttcaaataatatccag
aatgtgagaatcaagaaggaaaatatggaatgtgaaccaaaagatcaggaagctcagaaa
gttggtggagatcatgccaaagtcgtggaacccatggccgaggatgtctcaggccccaag
gcttcagatgttagttccatggccatagacgaacctgggagtgtgaaggccgagcagcag
gacactcaaaataagttgtctgaaacgcctgtatttgcacaccaaaaaccctga
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