Musa acuminata (dessert banana): 103985155
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Entry
103985155 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC103985155 isoform X2
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103985155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103985155
03019 Messenger RNA biogenesis [BR:
mus03019
]
103985155
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103985155
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103985155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
103985155
NCBI-ProteinID:
XP_009401056
UniProt:
A0A804J666
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Position
BXJ2-5:complement(36733457..36756436)
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AA seq
587 aa
AA seq
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MLPFFQSPAVNIHAQVPNDPSLQQAALFNQMQFPDPSFVNSSNRNTNSNGFSATNVAAAA
AAVAPLMAPSSFLNCPNILPVVQNNRLSVFPQQHVQFGPAQHLNQQLLALQLLGISRGMP
QNAQQFQGQLQNLNMFTPLPPGVGPFSVNNRPQNFNFIGGLPNGQICFPTTMMHRNQIAD
LNSPASSCLGSNKPEHLGNHPMVAVGNSHTSLCNGALCTGGKKISFTHEGKHESLVNPKK
LHQPNIWSPTKNHHPLKYNQPGNLWPQVHCLEDGGSDIISVNSAKKGFTRHLHGQRKTKY
TRKPQFQDSKSIESNKRMFNGTSGRVQKKWKGEPQFAKCNKPILTERPRCLPVTYTEHEI
QQWIEARRKNFPTTANIKKKLVQSDVNNEDADDDAQLRRQQLKQVLAKQAELGVEVAEIP
QGYLSELENQFGGQENNSKVLNMTNNFPNKHICKRVRHQEKWQAKRLKLTNESSADAASI
LRREPTLLRKLLSSDIRRDNSRLLQAFRFMILNSFFEHWPGKLLEFPSFTVRGIQCENGT
AVEKTSSLNCINNVEFEVGQCSVVKEIEGPKQNCVRDDAGFSSENGQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcttccctttttccaatcgcccgccgttaatatccatgcccaagtgcccaacgatccc
tctctccaacaggcggccctgttcaaccagatgcagtttccagacccttctttcgtcaat
tcaagcaatcggaataccaattcgaacggtttcagtgcgacaaatgttgctgccgccgcc
gctgctgtggctcctctgatggctccgtcttcctttctgaattgccctaatattttgccc
gtggtgcaaaataatcgcttgagcgtcttccctcagcagcacgttcagtttgggcctgct
caacacctgaaccagcagcttttggcgttgcaacttctcgggatatctcgtggcatgcct
cagaatgcacaacagttccaagggcaactgcagaacctgaacatgttcaccccgcttcca
cctggtgttggccccttttctgtgaacaatcggcctcaaaatttcaactttattggtggc
ttacctaatggacagatatgttttccaactacgatgatgcacaggaatcaaattgctgat
ctcaactctcctgcatcatcgtgcttgggttctaacaaacctgagcatcttgggaatcac
ccaatggttgctgtgggaaattcacatacaagtttatgtaatggtgcattgtgtacggga
gggaagaaaatttccttcactcatgaaggcaaacatgaatctcttgtcaatcctaagaag
ttgcatcagcctaatatatggagtcctacgaaaaatcatcatcctttgaagtataatcaa
ccaggaaacttgtggcctcaggtccattgtcttgaagatggtggaagtgatataatttct
gtaaattctgcaaaaaagggtttcactagacatcttcatgggcagagaaagacaaaatat
acaagaaaaccacagtttcaagattccaaaagcatagagagcaataagaggatgtttaat
ggaactagtggaagagttcagaagaaatggaaaggagaacctcagtttgcaaagtgtaac
aaaccaattttaacagaacgcccaaggtgccttcctgtaacttacactgaacatgaaatc
caacaatggattgaagcacgacggaagaatttcccgaccacagccaacatcaagaagaaa
ttggttcaatctgatgtcaataatgaagatgctgatgacgatgcccaattacgccgccag
caattgaagcaggttctagctaaacaggcagaattgggtgttgaagtagctgagataccc
caaggctatctttctgaactggagaaccaatttggtgggcaggagaataattcaaaggtg
ctgaatatgaccaacaattttccaaacaaacacatctgcaagagggtcaggcatcaagaa
aagtggcaagcaaaaaggctgaagttgacaaatgaatcatctgctgatgctgcttcaatt
ttgagaagggaaccaactcttttgcgaaagctcctgagttctgatattagaagagacaac
agcaggcttttacaagcttttaggttcatgatcctaaattctttctttgagcattggccg
ggaaaacttttggagtttccatcttttacagtgagaggcatacaatgtgaaaatgggact
gcagtggagaagacatcatctttgaattgcataaacaatgttgaatttgaggttggccag
tgttctgtagttaaggaaattgagggtccgaaacaaaattgtgttagggatgatgcaggt
ttttcaagcgagaatggccagtaa
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