Musa acuminata (dessert banana): 103985574
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Entry
103985574 CDS
T03447
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103985574
09122 Translation
03013 Nucleocytoplasmic transport
103985574
03015 mRNA surveillance pathway
103985574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103985574
03041 Spliceosome [BR:
mus03041
]
103985574
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103985574
Spliceosome [BR:
mus03041
]
Complex C
Other components
EJC/TREX
103985574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
103985574
NCBI-ProteinID:
XP_009401590
UniProt:
A0A804J7Y1
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Position
BXJ2-5:complement(42800428..42812054)
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AA seq
198 aa
AA seq
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MAAAAGDVEVVDFEPDDDDLMDEEVAAAEVDPSPAPRLRSAIAGSDSSGPRKTKGRGFRE
EAGRDSDSRLAARDFDSLDSDGGPGPQRSIEGWIVLVTGVHEEAQEDDLHNAFREFGQVK
NLHLNLDRRTGFVKGYALIEYENFDEAQAAITTLNGTELLTQTIYVDWTFSKGPIKRRNM
RRRSPRAHRSRSPPRRRY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgcgggggacgtcgaggtggtggatttcgagcctgacgatgacgatctc
atggacgaggaggtagccgccgccgaggtcgacccctcccctgcccccaggctccgatcc
gccatcgccggcagcgattcctcgggccctaggaagaccaagggccggggatttcgcgaa
gaggcgggtcgcgatagcgacagccgccttgccgccagggatttcgattccctcgactcc
gatggcggtcccggtccccagcgatctattgagggatggattgttctagtaactggggtc
catgaagaggcacaggaagatgatttgcacaacgcctttcgtgaatttggtcaggttaaa
aatttgcatctaaatcttgaccgtcgcactggatttgtcaagggttatgccctgattgaa
tatgagaactttgacgaagcacaagctgcaatcacaacactaaatggtaccgagctcctt
acacaaacgatttatgttgattggacatttagcaaaggtccgatcaagcgaagaaacatg
aggagaagatctccacgtgctcatcgatcaaggagccctcctaggaggagatactga
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