Musa acuminata (dessert banana): 103986251
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Entry
103986251 CDS
T03447
Name
(RefSeq) SAC3 family protein B isoform X2
KO
K23719
nuclear mRNA export protein SAC3
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103986251
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
103986251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
103986251
NCBI-ProteinID:
XP_009402468
UniProt:
A0A804JA16
LinkDB
All DBs
Position
BXJ2-5:complement(46845753..46863874)
Genome browser
AA seq
1718 aa
AA seq
DB search
MAFHDFKHCPGPSAPPSSQVPVIFPSGPSTPKTNIFHEKGQFPSAQINQPRQRQGKVSSR
AQSQLNEPVRLGHPTNQGRVLLGATHGTASHVEAKFPSQFSNYHVPGRTRSPVLPSHDAA
NLMNHYPTADHIRNPVTYSFVSQLNEPLRLGHPTNHDRLLPGATHATASHVEAKFPSQFS
NYHVPGRTNSPTVPSRDDVNLENYNPTADHRRNPVTSSFVSQLNEPLRLGHPTNHDRHLL
GATHVTASHVDAKFPSQFSNYHVPARTRSPTLPSRDAANLVNHYPTADQGRHSITSSSFG
NPLDEPLGPGHPTNQDRPWHAQEHFTGSQDVEAKFPSQVSNYRVPGRTRSPTLPSRDAAN
LVNHHPTADHRRSQIHTNVHIGNANSDNSNITLPSFSFDEEAKRHDITPPRVTNQRKPPV
QHSNSPPPERLKMVDYSDIYGTGVDASSKHSFSKEPKRARSPYPPSAAVVGSSSVQHDFE
REMQAKARRLARFNFELTQPAENLLDANRKTPENKLSQASVDKWDADKPAEARDSLNREN
LLEIESSESSPVVVGLCPDMCPESERGERERKGDLDKYERLDGDRNQTSKYLAVKKYNRT
AEREVDLIRPMPVLQMTVDYLLNLLNQPYNEDFLSIYNFLWDRMRAIRMDLRMQHIFGRQ
AMVMLEQMIRLHIVAMHELCEYNKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKQGI
SVPTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEMRCTQEIVFARNVARSCRIG
NFIAFFRLARKATYLQACLMHAHFAKLRTQALASLHGSLQNNQGIPVTHIMSWLGLEEED
VESILEYHGFVLKKFEESYMVKEGPFLSSDKDFPTKCSQLVHLKKSPRIIDDIYSGPPIS
HITEGRETGVYNEFDMVDQRADASEVDTREISSNDVIHDYEANITQRAITQSRKLLEEQP
IPLLNRETDAKVAEAFLPSSTSLVDHNVSNHAQRIEDAQMIELENDATMDQTILPKHEVN
MVRDLASVSSPAPVSSLAPVSSLLNNVGDSSASQMDIERELDNEDQLLVLHHKNKVAEEK
LRLILRKWKHQATKKRETREQKNTLANAALCSLSVGVPFRQSQHIPRLAYSELNINHALR
ARYEKLSKSWSTINVSELVAPVLHTRNPDASCLCWKLLIPVQPLLKEGQISRWLLSKVMG
SSKENHKPIVSMPHLSIWSWISTQLSPFYNCCLSIIQEVVFDNNDMIPEDDIVSGTSAVV
FLVSESIPWEIQKVRLHNVLASIPSGSKLPLLILSSDVYAEENTDSSHSIIRRLGLHDAD
MTRIYSFSVVFLCDNDPQVKSNGFLKDDKLRGGLLWLAKHSPLQPTVCPVETHGVVLSYL
RSSLEFLENGDTSYFGPNHFISIFNAALDGLVEGISAAASTNVNHWPSPEVDLLEKSSNE
RIFVDRYLPSIGWSSPVRIQSLIRLIKGCKLPPFVNEMPWLKEGSHMGLKIPDQKLALQE
CLISYMTQSCQMLNADLAAIEAEILVQTAAYPELHGSCYYIIPRWSAIFRRIQNWRLINL
KTGGCSVAYLLEQHLDRLTAIDYTHSIGAAMPLNSSSMMQVLERKIGEEEYRTMHSFSTK
PSFDEIVEICCNIPLAEQPMSPPEPLDSSPMVHETGDALKSENLAVDEDEDLKCNKSGNG
ENGRSAISFFKMDDKLSMLLEKCTRLQDTIDEKLAFYF
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcatgatttcaaacactgtcccggcccctcggcccctccaagttcccaggtc
cccgtgatcttcccttccggcccttccacaccgaaaaccaacattttccacgaaaagggc
caatttccttccgcccagatcaatcagccgcgtcaaagacaagggaaagtgtcttctcga
gcgcaaagccaactaaatgaaccagttaggctaggtcatcccacaaatcaaggcagagtt
ttgcttggtgcaacacatggcactgcaagccatgttgaagctaagtttccatctcagttt
tccaactaccatgttccgggaagaactagatcaccggtgttgccatctcatgatgctgct
aatcttatgaaccattatcctactgccgatcacataaggaatcctgtcacttatagtttt
gtcagccaactaaatgagccacttaggctaggtcatcccacaaatcatgacagacttttg
cctggtgcaacacatgccactgcaagccatgttgaggccaagtttccgtctcagttttcc
aactaccatgttcctggaaggaccaattcacctacagtgccatctcgtgatgatgttaat
cttgagaactataatcctactgctgatcacagaaggaatcctgtcacttctagttttgtc
agccaactaaatgagccacttaggctaggtcatcccacaaatcatgacaggcatttgctt
ggtgcaacacatgtcactgcaagccatgttgatgctaagtttccatctcagttttccaac
taccatgttcctgcaaggaccaggtcaccaactttgccatctcgtgatgctgctaatctt
gtgaatcattatcctactgctgatcaaggaaggcattctatcacatcttctagttttggc
aacccactagatgagccacttgggccaggtcatcccacaaatcaagacagaccttggcat
gcgcaagaacacttcactggaagtcaagatgtcgaggctaaattcccatctcaggtttcc
aactaccgtgttcctggaaggaccaggtcacctaccttgccatctcgtgatgctgctaat
cttgtgaaccatcatcctactgctgatcacagaaggtctcaaatccatacaaatgtgcat
attggaaatgcaaattctgacaattcaaacatcacattaccatccttctcttttgatgaa
gaagctaagaggcatgacataacccctcctagagtgaccaatcaaaggaagccacctgtt
cagcactctaattcgccacctccagagaggttgaaaatggtagattattctgatatatat
ggtactggagtggatgcttcatcaaagcattctttttctaaagaacccaaaagggccagg
tctccctacccaccatctgctgctgttgtaggctcatcttctgtccaacatgattttgag
agagaaatgcaagcaaaggcaagacggttggcccgcttcaattttgagctaacccaacca
gcagaaaacctgcttgatgctaatcgtaagactccagaaaataagctcagtcaagcttct
gtggacaaatgggatgcagataaacctgctgaagctagggactcattaaacagagagaat
ttacttgaaattgaaagttcggaatcatctccagtggtggtcgggctatgtccagacatg
tgtccagaatcagaaagaggggaacgtgagaggaaaggggatctcgataagtatgagaga
ttggatggtgacagaaaccaaactagcaagtatcttgctgttaaaaagtataacaggaca
gcagagcgtgaagttgacttgatcaggcctatgccagtgctgcagatgacagttgattat
cttctgaatttgttaaatcaaccttataatgaggatttcttgagcatttacaacttcttg
tgggatagaatgcgagcaataaggatggaccttagaatgcaacatattttcggccgccag
gctatggtcatgcttgagcaaatgattagacttcatattgttgctatgcatgagctttgt
gaatataataaaggagagggcttctcggaggggtttgatgcacatctaaatattgaacag
atgaataagacatcggttgagctgtttcagatgtatgatgatcacagaaagcaaggaatc
agtgtacctacagaaaaggagtttcgaggttattatgcactcctgaagttagataaacat
ccaggatacaaagtggaacctgcagagctctcacttgaccttgctaagatgactcctgag
atgagatgcacccaagaaattgtgtttgctcgaaatgtagccagatcttgtcgaataggt
aattttattgccttctttcgtcttgcgagaaaagcaacttacctgcaggcctgcttgatg
catgctcactttgcaaagttgagaacacaggcacttgcttccctgcatggtagtcttcaa
aataatcaaggtatccctgtcacacacatcatgagctggctagggttggaggaggaggat
gtagaaagtattctagaatatcatggattcgtactaaagaaatttgaggagagctacatg
gtgaaggaaggtccatttcttagtagtgacaaggattttcctacaaagtgttcacagctt
gtgcatctcaagaagtcaccaagaattattgatgatatttattctggtcctcccatatct
cacatcactgagggaagagaaacaggggtgtataatgagttcgacatggttgatcagaga
gctgatgcatctgaagtagatactcgggaaatttcaagcaatgatgtaattcatgattat
gaagccaacatcactcagagggccattacacaatctagaaagctccttgaggagcagcca
atacccttattaaacagagaaactgatgccaaagtagcagaagcctttcttccaagcagt
acttctttagtggatcacaatgtaagtaaccatgcacaacgaattgaggatgctcaaatg
attgaattagaaaatgatgccaccatggatcagacaattttgcccaaacatgaagtaaat
atggtcagagatctagcatctgtcagttctccagcacctgtcagttctctagcacctgtc
agttctctactcaacaatgtaggtgatagttcagcatctcaaatggatatagagagagaa
ctagataatgaagaccagttgcttgtgcttcaccacaagaataaagttgccgaggagaag
ctaaggctgatcttgaggaagtggaagcatcaagcaacaaaaaagagagaaacccgtgag
cagaaaaatacgctagcaaatgctgcactgtgctcgctttcagtgggagttcctttccga
caaagtcaacatattcccaggcttgcttatagtgagcttaacattaaccatgctttgaga
gcgagatatgagaaactaagcaaatcatggtcaacaattaatgtgtcggaactggttgca
ccagtattacacacaagaaatcctgatgccagttgcctttgctggaagctgcttattcct
gtccagccgttgcttaaagagggtcagatttcaagatggttgctctcaaaagttatgggt
tctagtaaggaaaaccacaagccaatagtttctatgccccacttatctatatggagttgg
atcagtacccaacttagtcctttctataactgttgcctgtctattattcaggaggttgtg
tttgacaataatgatatgattcctgaagatgatattgtttctggaactagcgctgttgta
tttcttgtatcagaaagtattccatgggaaattcagaaggtgcgacttcataatgttcta
gcatctataccatctggatcaaaattacccctcctgatactaagcagtgatgtatatgct
gaagaaaatactgattcttcgcattcaataattaggaggcttggacttcatgatgcagac
atgactagaatatactcgttttcagttgtcttcctatgtgataacgaccctcaggtgaag
tcgaatggttttctcaaggatgataaattgagagggggtctgctatggctggcaaagcat
tcacccttacaacctactgtttgtccagtggagactcatggagttgttctgagctacttg
agatcttcattggagtttctagaaaatggtgatacctcttattttggtccaaaccatttc
atctcaatcttcaatgcagcactggacggattggtcgaggggatttcagcagctgcatcc
acaaatgtaaaccattggccaagtcccgaggttgatctgcttgagaagtctagcaatgaa
cgcatttttgtggataggtacttaccaagcattggatggagctcacctgtgagaattcaa
tcactcatcagattgataaagggctgtaagctaccaccgtttgtaaatgaaatgccttgg
ctaaaagaaggttctcatatgggcttgaagattccagatcaaaagctggcccttcaagaa
tgtttgataagctacatgacccaatcatgccagatgttaaatgctgatctagctgctata
gaggcagaaatactggtgcagactgctgcatatcctgagcttcatggttcgtgttactat
atcattccaagatggtcagcgatattcaggaggattcagaactggcggttaattaatctg
aaaactgggggttgctctgttgcatatttgttggagcagcatctggacaggcttactgca
attgattatacacacagcattggtgctgctatgccattaaactcaagttccatgatgcag
gttttggagaggaaaatcggtgaagaagagtatcgaacaatgcattctttttcaacaaaa
ccgtcttttgatgaaattgtggagatttgctgcaatattccacttgcagagcagcccatg
tcaccgcctgagcctttagattcatctcccatggtgcatgaaactggtgatgctctgaag
tctgaaaatttagctgtggacgaggatgaggatctgaagtgtaacaaatcagggaatgga
gaaaatggaagatcagctatttctttcttcaagatggatgacaaattgtccatgctcttg
gagaaatgtacaagactgcaagacaccatagatgaaaaacttgcattctatttttga
DBGET
integrated database retrieval system
