Musa acuminata (dessert banana): 103987338
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Entry
103987338 CDS
T03447
Name
(RefSeq) protein RST1 isoform X1
KO
K27498
focadhesin
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103987338
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103987338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
103987338
NCBI-ProteinID:
XP_009403886
UniProt:
A0A804JES7
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All DBs
Position
BXJ2-6:7710378..7746304
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AA seq
1835 aa
AA seq
DB search
MESSAAASFDHLLDKTRLPQPSFQRLAVASLFKKLRSAPPPLGLASGPARDALSRCLSSP
SAPVADQAVRELCSLVKDGLLPVPAALLELQSALDGCTPGFASLFVKGIGFLARFAFRAD
PSWGRRFDPVELHPFIKVLSCRTEVHQELIQQVLLFIVQNKSLGMETVSGFLRPFLLFSV
LRTSSSSSFTRDLISSVASFSCSFPSQSIGILNLLVGCTRHLPLANEEDFKCLLVSSEYL
VDAFIVVLKQLSCGETVFQSVSVDAKACGIELLENLLSVAIGCTKPWGGVEVLLELAKRL
LVAQRNCGLPYPAELVTVIVSVSIILTQAEFEHEHLSALKLLIFLNEWKKENEDNSKGIA
CYHGEDLLCIFPLINLLSSPSQSVKASASHLLSRATRQVLELSDDPRKVQIPTSGTSTLR
LGFILLRLLHHLWFQNHDEKIGFIGSQCGVMTSWTSQLKEYLSTVRRQKYNSIIQSPESS
SGGLTSLFSSVASILLVHPKLSTSAVDSLAAIGGMDYKLGMPLLLTVLFHIKMLCRDKCD
SLKMLPRLLEMLPSLATHSVMVPLILQTVLPMLHKSANPVLYGTAVRLLCKTWVINDTAF
GTLQGLLDPQAFSHFMSQREICISLAASLRDICCHNPDRGVDLILSISSSIESRDPLVHA
LGLESLAHLCEADVIDFYTAWDVISDHMLDYFSDPIVAHGLCILLRWGALDAEVYSETSR
NVIKILWEIGTSRFANYEFLWVKARIVAFESLSHYEVANIQEAIPEFKRRNLECLVSEDN
MELLNAMEKLEVKILKFEHITRRRMLRQKRVVVHKVEKLLDVFPQAIFTAGKQLGELPGA
ALLCLVYTPKDLNSQATTKDSGKLHSEYERALLEIAESLHISRNIFMGFLALQSWKHFMH
RWLRAVVLLADAKSSSAFDKNNKVANDILKTLCRVGAESIPQISANIAFAIGALCMVLPS
SAHMVISAASEFLLKWLLEYEHEQRQWSAAISLGLVSTCFDATDWKQRFEVVNGLLKVLC
ESKSHLVKGACGMALGFACQNLLNTTEIGNGSGLEGQNTRITEISLLQDIINTLSLMICK
LCPAATDSLKNLNVSFSPSQQSMSSNLFLGNLYDLEEDGWGVVGLVLGLGNSVIALYRFG
AYDAILKIKDLLVSWISYDLLGPGSLVSNELSEIPLCMGSCLALPTVAAFCQRNELVNID
FDFLFGSYYSLISELLSLKKSGSAYQNLLVASCIGAGSFLSCIMSLGMHMVKFDNVKHLM
EVLRTTYTSSFPPPVCFAGMLGVVNAFGAGAGDLIQMYPQATNFQLNCEQESSFVSGPIL
YSPACETLSTSMVQEMFLIAKDSKDQQIKNYAAWALSFLRCRWWSSEFQDMISSQNSSLS
SNSSAQTFDEESLVWKLCLWLSDVNKNKAGEVMDASTVAAVLRWLSNAPRLPPLDWGVII
RRCMRYDPQLSAEAHKRYCLTSLREECLNFSLVHANHVSPFLQFVDELSVLSRFRTLELN
LQTFLVEHLLNICKIFSGRRLEKLFVDLVEYFRSTSYLAYEPEKKSRLRVYFWKGLHHCL
TEAPEELSITSNVEKCMACLLSLLPELTSDGFSEEHIDSIGEWPVAVRCLAKAREEWLVD
ILQVSVIGQLHGESSSFVAKIISIKAKLVGMGRFPVSEMSELKAHVLNARTEGPWWSMLV
EVAASLLTAEGRIKRQWLLDAFEISCISEYPSTALRFIGLLSSRWCMYMPLLTIEPTTVL
SDLPVTLPSLLSDSSWSIIAGPLVDKLWVCTMRICTWAERLTIAGGSSTLDQIDASEAGL
SIFLAHAMHETCLSLKQFLPFEKQLKLATLVVARV
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccgccgccgcctccttcgatcacctactcgacaagacgcgcctaccgcag
ccctccttccagcgcctcgccgtcgcttctctcttcaagaagctccgttccgcccctccc
ccactcggccttgcctccggccccgctcgcgacgcactctcccgctgccttagctccccc
tccgcacccgtcgctgaccaggccgtccgcgagctatgctccctcgtcaaggacggcctt
ctcccggtccccgccgcccttctcgagctccaatccgccctcgatggctgcacacccggc
ttcgcctcgcttttcgtcaagggaattggtttcttggcccgcttcgccttccgtgcagat
ccgtcctggggccgccgcttcgaccctgttgagctccaccccttcatcaaggtcctttca
tgtcgaacagaagtgcaccaggaactcattcagcaagttttgttatttatagtgcaaaac
aagtcactcggaatggagacagtctcggggttcttgaggccttttctcttgttctcagtt
cttcggacttcttcttcttcatcttttacaagggatttgatctcttccgtggcatcattc
tcgtgttcgttcccatcacaatctattggcatattgaatcttcttgttgggtgcacacgg
cacttaccactagcaaatgaggaggatttcaagtgcctgttggtttcttcagagtacttg
gttgatgcatttatcgtggtcttgaagcagctgagttgtggcgaaaccgtattccaatcc
gttagcgttgatgccaaagcatgtggtattgagctactagagaatctgttgtcagtggct
attggctgtactaagccttggggtggagttgaagttcttcttgaattggcaaagcgtcta
ttggtggcccagagaaactgtggcttgccatatccggctgagcttgttacagttattgtg
tctgtctccatcattctcacccaggcggagtttgaacatgagcacttgtctgctttgaag
cttttaattttcttgaatgagtggaagaaagaaaatgaagacaatagcaaaggaattgct
tgttatcatggtgaagatcttttgtgtatctttcctctcatcaacctattgtcctctcct
tctcaatctgttaaagcttcggcatctcacttactttcaagagcaaccaggcaagtttta
gagttgtcagatgatccgagaaaagtgcagatccctacgtctggaacgtctactttgagg
ctaggatttattcttctaaggcttctgcatcatctttggttccagaatcatgatgaaaaa
attggatttattgggtcacaatgtggtgtaatgacaagttggacgtctcaactgaaagag
tacctgtcaaccgttagaaggcaaaaatataattcaattattcaatcaccagaaagttcc
tcaggaggattaacttcattatttagctctgtggcttcgattttgcttgtacatcctaaa
cttagcacgtctgctgttgattctttggctgcaattggtggaatggattataaactgggt
atgccactgctgctaacagttctcttccacattaagatgctatgcagagacaagtgtgac
tcccttaaaatgttgcccagacttctggaaatgcttccatcgctcgctacacattctgtt
atggttccgttaattttacaaacagtgttgccaatgctccacaagagtgcaaatcctgtg
ttatatggcacagctgttcgtctactatgtaagacatgggttatcaatgatacggctttt
ggaactttgcaaggacttctggatccccaagccttttctcatttcatgtctcagagagaa
atttgtattagccttgctgcttcactgcgtgatatctgctgccataatcctgacaggggt
gttgatctcatattgtctatctcgtcatctattgagagccgtgatcctcttgtgcatgct
cttggattggaaagccttgctcatctttgtgaagccgatgtaattgacttttacacagct
tgggatgttatctcagatcatatgctcgattatttcagtgaccctattgttgctcatggc
ttgtgcatcttattaaggtggggagcattggatgcagaagtttattccgaaacatccaga
aatgttatcaagatattgtgggaaattggaacatctaggtttgctaactatgaatttctc
tgggtaaaagcacggatagttgcatttgagtcattgtcccattacgaggttgcaaatatt
caggaagccattcctgaatttaagagaagaaatttggagtgtcttgtttctgaagataat
atggaattactcaatgcgatggagaaacttgaagtcaagattttgaaatttgaacacata
actcggcgtaggatgcttagacagaaaagagttgtggtgcacaaagttgaaaagctattg
gatgtctttcctcaagcaattttcactgcaggaaaacaacttggagagttaccaggtgca
gctttattatgccttgtttatactcccaaggatttaaattctcaagcaacaacaaaggat
tcaggtaaactacattctgaatatgagagagctctgctggaaatcgctgaatcacttcat
atatcaagaaacatttttatgggatttcttgcactgcaatcatggaaacatttcatgcat
cgttggctgagagcagtggttctgcttgctgatgctaaatcatcttctgcatttgacaaa
aacaacaaggttgccaatgatatcttaaagactctttgcagagttggggctgagtctatt
ccacagatttctgcaaacattgcctttgctattggtgccctgtgtatggtcttgccttca
tcagcccatatggtaatctctgctgcatcagaatttcttttgaaatggttgcttgaatat
gaacatgaacaacgacagtggtctgctgctatttctcttggtcttgtatctacttgtttt
gatgcaaccgattggaagcaaagatttgaggttgtgaatggacttctcaaggtactttgt
gagagcaaaagccatcttgttaagggagcctgtggtatggcattgggttttgcttgtcaa
aatcttctgaacacaactgaaattggtaatggttctggtttggaaggacaaaacaccagg
attactgaaatctcactacttcaggatattattaataccttatctctgatgatatgcaag
ctttgccctgctgcaactgattctttgaaaaatcttaatgttagcttttcaccgagtcaa
cagtcaatgagttcaaacttgttccttggaaatttgtatgacttggaagaagatggttgg
ggtgttgtaggtcttgtacttggcttgggaaactctgttattgcactatatcgctttgga
gcttatgatgccattcttaagataaaggatctgttagtttcgtggatctcatatgattta
cttggacctggctcattagtgtccaatgaattgtccgagataccattatgtatgggatca
tgtcttgctcttccaactgttgcagctttttgccaaagaaatgaattagtgaacattgac
tttgattttctatttggtagctattattcactgatttctgaacttttaagtctaaagaaa
tctggtagcgcttatcagaatttgctggtggcttcttgtatcggtgctggatcatttctg
tcctgcataatgagtttggggatgcacatggtgaaatttgacaatgtaaagcatcttatg
gaagttctaagaaccacttacacttcctcatttccacctcctgtctgttttgctggaatg
ctgggagttgttaatgcatttggtgctggtgctggggatctcattcaaatgtatcctcaa
gcaacgaactttcagctcaactgcgagcaggaatcatcatttgtcagtggtccgattctt
tatagtccagcttgtgaaacactctcaacctcaatggttcaagaaatgtttttgattgcc
aaggactcaaaagatcagcaaataaaaaattatgctgcatgggcactttcatttcttaga
tgccgatggtggtcaagtgaatttcaagatatgattagttcacaaaatagttccttgagt
tcaaactcatcagctcaaacttttgatgaagaaagcttagtttggaaactctgcttgtgg
ctaagtgatgtcaacaaaaacaaggccggggaggtcatggatgcaagtactgttgcagct
gtcttaagatggctttccaatgctcctagattgcctcctttggattggggagtaatcatt
agacgctgcatgaggtatgatccacaattatctgcagaggcacacaagagatattgtctc
acatcacttcgggaagaatgtttgaatttttctttagttcatgcaaatcatgttagccct
ttcctgcaatttgtggatgaactctctgtcctgtccagattcaggacacttgagctaaat
ttgcaaacgtttttggttgaacatctcttaaacatatgcaaaatattctctggtcggagg
ttggagaaactgtttgttgatttggttgaatacttccgttctacttcctacttggcttat
gagccagaaaagaaaagccgattaagagtttatttttggaagggcctgcatcattgcctt
actgaggccccagaagaactcagcattacatcaaatgtggaaaagtgcatggcctgtctg
ttatctttgttgcctgagctgaccagtgatggcttttcagaagagcacattgattctatt
ggggaatggccggttgctgtaagatgcttggctaaggctcgagaagagtggcttgtggat
attctgcaggtctctgttattggtcagttgcatggagaaagtagttcttttgtagcgaag
atcatctctataaaagccaagctggttggtatggggcgctttcctgtttctgaaatgtca
gagctaaaagcccatgtgttgaatgcaagaactgaaggtccatggtggagcatgcttgtg
gaagtcgctgcatctctattgactgctgagggtagaatcaaaagacaatggcttcttgat
gcatttgagatcagctgcatatcagaatatccctctactgcactgcgttttataggtttg
ctatcaagtagatggtgtatgtacatgccacttctgaccattgaaccaactaccgtcttg
agtgacttgcctgtcaccttgccatctcttctatctgacagctcctggagcatcatcgct
ggacctctagtggataagctctgggtatgcaccatgcggatctgcacctgggcagagcgg
ctgactattgctggtggttcgtcaaccttggaccaaatagacgctagcgaagccggcttg
tccatcttcctggcgcacgcgatgcatgagacatgcctctccttgaagcagttcttgcca
tttgaaaaacagctgaagcttgcaacccttgtggtcgcacgagtttga
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integrated database retrieval system
