Musa acuminata (dessert banana): 103988146
Help
Entry
103988146 CDS
T03447
Name
(RefSeq) F-box protein SKP2A isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103988146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103988146
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103988146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
103988146
NCBI-ProteinID:
XP_009404960
UniProt:
A0A804JI70
LinkDB
All DBs
Position
BXJ2-6:complement(14803558..14809464)
Genome browser
AA seq
367 aa
AA seq
DB search
MLGKSSESGDLDVWFKRLIVSGGGGKMEGAGDVMTGWKDLPMELLLRVLSPVDDRTVIVA
SDVCTSWRDALRLGITSISLSWCKYNMNSLVKSLAPKFVKLQVLTLRQNYRPQLEDDAVE
TVARYCHDLRDLDLSKGLKLSDRSLYALADGCPHLTKLNISGCEAFSDYALVYLSSCCKN
LKNLNLCGCSAAASDRALQAISFNCPKLQYLNLGWCEDISDEGVTNLAVGCPDLRALDLC
GCVHITDKSVIALANGCPHLRSLGLYYCQNITDRAMYSLANSRARNDTRMWQNSSHDQEG
LVNLNISQCTALTPPAVQAVCDSFPGLHTCPGRHSLIISGCLSLTSVHCGCTFQTSRAGG
ATLAGDA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtaagagttcagaatcgggagatttggacgtttggtttaagcgcctcattgtg
tctggtggtggagggaagatggagggggcaggggatgtcatgacaggttggaaggacctc
cctatggaacttttgctgcgagtcctgtctccagtggacgaccggactgtgattgtggct
tcagatgtttgtactagctggagagatgcactgcggttgggaattactagtatttctcta
tcatggtgcaagtacaacatgaacagtcttgtgaaatcgcttgcccctaagtttgtgaag
ctgcaggtgttgacacttcgacaaaattatcgacctcagcttgaggatgatgctgtggag
actgttgctaggtactgccatgatttgagggatctagaccttagcaaaggcctgaaactg
agtgaccgctctttgtatgctttggccgatggatgtccccacctaacaaaactaaacatc
agtggttgtgaagcctttagtgattatgctcttgtatacctgagtagttgctgcaaaaac
ctgaaaaacttgaacctttgtggatgttcggcagctgcatcggacagagctctacaggct
atttcatttaattgccctaaattgcagtatttgaatttgggctggtgtgaagacatcagt
gatgaaggagttaccaatttggcagtaggttgccctgatctcagggcgttggacttgtgt
ggctgtgttcatataacagataaaagtgtgattgcattggcaaatggctgtccgcatctg
agatctctcggcttgtattactgccaaaacatcactgatcgggccatgtactcgctcgca
aacagccgtgcaaggaatgacactcggatgtggcagaacagcagccatgaccaagaagga
ctagtgaacctgaacatcagccagtgcacagccttgacacctccggcagtccaagctgtt
tgtgactcattcccagggcttcatacctgccccggaaggcactcactcatcatcagcggc
tgcctcagcctcacttctgttcactgtggttgcacctttcaaacttcccgtgccggtgga
gcaactttagctggcgatgcttag
DBGET
integrated database retrieval system