Musa acuminata (dessert banana): 103988615
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Entry
103988615 CDS
T03447
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03430
Mismatch repair
mus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103988615
03460 Fanconi anemia pathway
103988615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
103988615
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103988615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103988615
NCBI-ProteinID:
XP_009405473
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Position
BXJ2-6:17129553..17150117
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AA seq
919 aa
AA seq
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MEGEGDSQVIKPINKAVVHRICSGQVILDLSSAVKELVENSLDACASSIEINLKEYGEEY
FKVIDNGCGISPQNFQALALKHHTSKISEFSDLHSLRTFGFRGEALSSLCTLGNLIIETR
TKNEPLGTHLIFDHYGLVTAEKKIARQVGTTVTVEKLFSTLPVRSKEFSRNIRREYGKLV
SLLNAYALIAKGVRLLCTNTTGKNSKSMVLKTQGSSSLKDNIITVFGLSTLQCLEPLNLC
VSEGCKVEGFLSKSRYGSGRNLGDRQYFYVNGRPVDMPKVGKLVNELYRYSNSKQFPIAI
LNFIIPTTSYDVNVTPDKRKIFFSDEDGLMLSLRAEVEKIYCPHHCSYTVNMIEKPEKEA
HTSQVVASEDKNPLSASKELSPEDGVCSQVFFKDNSPKILQVKELDEEKGILLNEKNSMP
EKVNTSLCEMKDSGSPSAHAHQFQHSSDFHEPKIDEMAINHFRLERNNNSTRSNLVQSSL
TNFVSPNKRKHENCCKVLSEVPVLRHETPSCQVRKTSSAMRTSVSESHQYVPEDDSPGAN
TIELLECQVPPDVSNKEEISFSGERDFHDRGSHESDSEMQDVPISPADATVCSDEDLKVK
SENISSLPPSSESHDEKYDTIKPCSTSKGYTVLQFRMDDLRRKTQLKFMKLHSSKQSDDR
SHRTKMGSCYTAATLENSQPENNEGKAESLAAATSELNRLFKKEYFGQMQVIGQFNLGFI
IGKIEQDLFIIDQHAADEKYNFERLSQSTILNLQPLLKPMRLELSPEEEVVASMNMQIIR
KNGFTLIEDMHASPGHRFLLKAVPFSRNIIFGAEDVKELISILSDNQGECGVMGCYKMDT
SDSVCPSRVRAMLASRACRTSVMIGDPLTKSEMQKILRNLADLNSPWNCPHGRPTMRHLA
DLAAIGYVRLKRNDVESII
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggagggtgattcacaagtcattaagccgattaataaggcggtggttcataga
atttgttcggggcaagtgatcttggacctctcgtctgctgttaaggagttggtcgagaat
agcttagatgcttgtgcaagcagtattgagataaatctgaaggaatatggcgaggagtac
ttcaaagttatcgacaatggttgtggtatctcccctcaaaattttcaggcccttgccctt
aagcatcatacatctaagatatcagaattttctgatcttcactccctgagaacttttggc
tttagaggggaagcactgagctccctttgtaccttggggaatttgattattgaaacaaga
acaaaaaatgaaccacttggtacacatttaatctttgatcattatggtttagtgacagct
gaaaagaagattgcacgacaggttggaaccactgtgaccgttgagaagttattctccact
ttgccagtgcgaagtaaggaattcagcaggaatatacgacgagaatacggaaagcttgtt
tctttattgaatgcatatgccctaatcgctaagggtgttcgattgctttgcacaaataca
actggaaaaaattcgaagtccatggtactgaaaactcaaggaagcagttcattgaaagat
aatatcataactgtatttggtctaagtaccttgcagtgcttagagccactgaatttatgt
gtatcagagggttgcaaagttgaaggctttctttctaagtctcgatatggtagtggtcgt
aatttaggagataggcaatatttttatgtaaatggcagacctgtagatatgccaaaggtt
ggtaaacttgtaaatgaattgtatagatattcaaattccaaacagtttcccatcgcaatc
ttgaactttatcataccaaccacatcgtatgatgtcaatgttactcctgataagcggaaa
attttcttttctgatgaggatggccttatgctctccctgagggcagaggttgagaagata
tactgtcctcatcactgcagttatactgttaatatgattgaaaagcctgagaaagaagca
catacatcgcaagtggttgcttcagaggacaaaaatcctttatcagcatccaaggaatta
tctcctgaagatggtgtgtgcagtcaagtattttttaaagacaattctccaaagatcctg
caagttaaagagttagatgaggaaaaaggaattctccttaatgaaaaaaactctatgcca
gaaaaagtgaatactagtttatgtgaaatgaaggattctggaagtccttctgcgcatgcc
catcaatttcagcactcaagtgactttcacgagccaaagatcgatgagatggcaataaat
cattttagactagaaaggaataataattctactcgttcaaatcttgttcagtcttctctt
acaaattttgtttctccaaacaagaggaaacatgagaattgttgcaaagtattgtctgaa
gtacctgtgttgagacatgaaacaccttcctgtcaagtcaggaaaaccagttcagctatg
cggacttcagtctcagaatcccatcagtatgttcctgaagatgattcacctggagccaat
acaatagagttgctagaatgccaagtaccacctgatgtctctaataaagaggaaatctcc
ttttccggcgaacgtgattttcatgatagaggatctcatgagtcagattcagaaatgcag
gatgtgcctatatcacctgctgatgctacagtatgttctgatgaagatttaaaagtgaag
tcagaaaatatatcaagcttaccaccatcatctgaatcacatgatgaaaaatatgatact
ataaaaccttgttctacttcaaaaggttacactgttttgcaattcaggatggatgatctt
agaaggaagacacagttgaaatttatgaaattgcattctagcaaacagtccgatgacaga
agtcacagaacaaagatgggaagctgctatactgctgcaacacttgaaaattctcaacca
gaaaacaatgagggaaaagcagaatctttggctgcagctactagcgagttgaatagattg
ttcaaaaaagaatattttgggcaaatgcaggtcattgggcagttcaatcttgggttcatt
attggaaagatagaacaagacttgtttattatagaccagcatgctgcagatgaaaaatat
aattttgaacgactctcacaatcaaccatcttgaacttacagcccctacttaagccaatg
aggttggaattatcaccggaggaggaagttgtagcttccatgaatatgcaaataattaga
aagaatggttttaccttgatagaagacatgcatgcatcacctggtcatcgattcctacta
aaagctgtaccatttagtagaaacatcatttttggagctgaagatgtcaaggagcttatt
tctattctttctgataatcaaggtgagtgtggagtaatgggatgttacaaaatggacact
tctgattctgtctgtccatcaagagtccgtgctatgttagcttcacgggcttgtcgaaca
tctgtaatgattggtgatccattgacaaaaagtgagatgcagaagatactacggaatttg
gcggatcttaattcaccttggaattgtccacatggtaggccaacaatgcggcatctggca
gacttggctgctattggctatgtaaggttgaaaagaaatgatgttgagtcaatcatttaa
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