Musa acuminata (dessert banana): 103989761
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Entry
103989761 CDS
T03447
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mus03016
]
103989761
Enzymes [BR:
mus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103989761
Transfer RNA biogenesis [BR:
mus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103989761
Prokaryotic type
103989761
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
103989761
NCBI-ProteinID:
XP_018682459
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All DBs
Position
BXJ2-6:42733708..42740588
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AA seq
506 aa
AA seq
DB search
MAAAAAAAASSLRLPIYPWLIPNHSSRILLSRCSTISLQNPLSNPRFSTVLCSSAPDEGG
GREGKRWDSFRKKKVVMRVGYVGTDYRAIEAELESAIYKAGGILDSNFGHLHKVGWARSS
RTDKGVHSLATMISLKMEIPEHAWKEDPSGIVLANYVNSNLPSNVKVFSVLPSQKRFDAR
RECTLRMYSYLLPAEIIGIKNDCCSAEVAEHLSEFGNILKGFEGEHPFHNYTVRSKYRKP
PPGKRDSRKRSRLTEDKLASEVEDSDDVGNFPVEDVAKDKPEENFILSCNTDSDEEAYES
SEQESNQIKNFGVPSPVRARWLHEPDEMDRLNASHFRKIFGFSCGNLETSLGINYVELSI
CGESFMLHQIRKMVGTAVAVKRGLLPKDIIEMSLAKFSRIVLPLAPSEVLILRSNRYAIR
GHPGNITRPEMQTMTESQEIQGAVDEFYSSVLLPKVSKFLDPSKSPWQEWVDNLETYTSI
SDEELDEVRKAWNVWKEGFSKAWNVD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggccgcggccgcttcttcccttcgactgcccatctacccctggctc
attccaaaccatagctcccgcatcctcctctcccgatgctctacaatctccctccaaaac
cccctctctaaccctagattctccacggtcctctgctcctcggctcctgatgaaggcggc
ggcagggaagggaagcggtgggattcctttcgcaagaagaaggtggtcatgcgcgtcggg
tatgtcggcactgattacagagcaattgaagctgagctggagtctgccatttataaggca
gggggaattcttgacagtaattttggacacttgcacaaagttgggtgggccaggagtagc
agaactgacaaaggagttcattctttggccaccatgatttcattgaagatggaaatacct
gaacatgcatggaaggaggatcctagtggcattgtgcttgcaaattatgttaactctaac
ttgcccagtaatgtcaaggttttcagtgttttaccttcccaaaagcgttttgatgcaaga
agggaatgcactctccgtatgtactcgtatctccttcctgctgaaattattggtataaaa
aatgattgctgctctgcagaagttgctgaacatctatctgagtttggcaatattctcaaa
ggttttgagggagaacatccttttcataactacactgttcgttccaaatataggaaacca
cctcctggtaaaagagactcgagaaaacgatcaagattgaccgaggacaaattggcctcg
gaagttgaggacagtgatgatgttggaaattttccagttgaagatgttgcaaaagataaa
cctgaagaaaatttcattttgtcatgtaacactgattctgatgaagaagcatatgaatca
tccgaacaagaatcaaatcaaattaagaattttggagttccttccccagttcgtgcaaga
tggcttcatgagcctgatgaaatggatagactaaacgcatcccacttcagaaaaatcttt
ggcttctcttgcggaaatctggagacatcattgggaattaactatgttgagttgtcaata
tgtggtgaatccttcatgctgcatcagatccggaaaatggttggaactgcagtggcggtg
aagcgtggattgctacctaaagatatcatagaaatgtcactggccaaattttctcgaata
gttctgccacttgctccttctgaagtcctaatcttaaggagtaaccgctatgctatcaga
ggccatcctggaaacataactcgacccgagatgcaaacgatgactgaatctcaagaaatt
cagggagcagtggatgaattctactcttccgttctcttgcccaaggtctccaaattccta
gatccatcaaaatcgccatggcaggagtgggtggataacttggaaacatacacaagcatt
tcggatgaagaactggacgaagttaggaaagcatggaatgtgtggaaagaaggtttctca
aaagcatggaatgttgattaa
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