Musa acuminata (dessert banana): 103990475
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Entry
103990475 CDS
T03447
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mus03032
]
103990475
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103990475
DNA replication proteins [BR:
mus03032
]
Eukaryotic type
DNA Topoisomerases
103990475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
RodZ_C
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
103990475
NCBI-ProteinID:
XP_009407901
UniProt:
A0A804JSU4
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All DBs
Position
BXJ2-7:complement(4767615..4776243)
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AA seq
951 aa
AA seq
DB search
MSVHGCINQVIDDNGEDDEGPIIFKRPNSSSKQSQLSCSSKKTAPQKHDGFNITSNQNAG
NGENSHVQNAKVFSTVKPLSEKPNVAISSSLSWASVQDTSYHKSTTNDVGPEHQDESSPE
VQESDDSSDDKPLSHRLNSVSVAVQKKKSTDLEKIHMHSLDHKFVKKSTDKMDLDKPIIK
NEDSDYSDDDKPLSYKFSSSAAVNKSGFSRVMKAPQSSKPTSPPSMKMNSNIKGFSDDSE
DEKPLLSRFQSKATGGSSMKDSNSDEKPFSSKLKVNGSSKKEGNSDNTFPKGGQKRPLGN
IKPTESSNIKKVKVSETPASVKVKHEIAVKKEIKADDSDQIPIAQRMKKTVSSNSTSVSK
SVLHKTHSSFKTDGKKMKTNVKDFKYSKSLKVPPGSGGGQKWTTLEHNGVIFPPPYKPHG
VKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKKQFIENFMNDWRQILGKNHVIKKFEL
CDFTPIYEWHLREKEKKKQMSAEEKKAVKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPG
LFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEIKHDNTVTWLAFWND
PINPKEFKYVFLAASSSLKGQSDREKYEKARLLKDYIHNIRANYTRDFASKDPTKQQIAV
ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNMLKFDFLGKDSIRYLNTVEV
ELPVYKAIGEFQTAKKSDGGRKGKGDDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASI
TLDDILNKETKDGSVPEKIAVYQHANKEVAIICNHQRSVSKSHENQMSRLNEKINDLKAQ
RDELKMDLSRARKGKPPLKDKEGKTKKNLSPEVIEKKLSQVDAKIEKLELDKQIKEDLKT
VALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPNFRF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcatggctgcatcaatcaagttatagatgacaatggagaagatgatgaagga
ccaattatttttaagaggccaaactcttcatcaaaacaaagtcagttgagctgtagttca
aagaagacagctccccaaaagcatgatggttttaatattacttctaatcaaaatgctggt
aatggtgagaactctcatgtgcaaaatgctaaagtgttctctactgtaaaaccattgagt
gagaagcctaatgtggcaatctcaagttcgctgtcttgggcatctgttcaagatacatcc
tatcataaatcaacaaccaatgatgtgggaccggagcatcaggatgagtcatctcctgaa
gttcaggaatcggatgattcaagtgatgataaaccactgagccatagacttaattcagtt
tctgtggcagttcagaagaaaaaatccaccgatttggagaagattcatatgcattcttta
gatcataagtttgtaaagaagagtacagataagatggatttggacaagccaatcataaaa
aatgaggattctgactattctgatgatgataaaccactgagctacaaattttcttcttca
gcagcagttaataaaagtggcttctcacgtgtcatgaaggcacctcaatcttcgaagccc
acttcacctccatccatgaagatgaattcaaacatcaagggattctctgatgattcagaa
gatgaaaaaccacttctttctaggtttcaatcgaaggccactggtggttcttctatgaaa
gattccaattcagatgagaagcctttctcttctaaattgaaggtaaatggttctagcaag
aaggaaggaaatagtgacaatacattccccaaaggtggccaaaagcggcctttgggtaac
attaaacctactgaatcttcaaatattaaaaaagtaaaagtttcagaaactcctgcttct
gtgaaagttaaacatgaaattgctgtaaagaaagaaataaaggcagatgacagtgatcaa
ataccaattgcacaaagaatgaagaaaacagtgtcttctaacagcacatcagttagcaag
agtgtgttacataaaactcactcatcattcaagacagatggcaagaaaatgaagacaaat
gtcaaggatttcaaatattcaaagtcattgaaggtgcctcctggttctggcgggggccag
aaatggactaccttggagcacaatggtgttatttttcctcctccatacaagccccatggt
gttaaaatgctctacaatggacagccagttgatttgactcctgaacaagaggaggttgca
acaatgtttgccgtgatgaaggacacagactatgccaccaaaaaacaatttattgagaac
tttatgaatgattggcgacaaatacttggtaaaaatcatgtcattaagaaatttgagcta
tgtgacttcactccaatatatgaatggcatctaagggagaaggaaaagaagaagcagatg
agtgccgaggagaagaaggccgtaaaagaagaaaaattgaagcaagaggagaaatacatg
tgggctattgttgatggtgtgaaagagaaggttggaaatttcagagtcgaaccaccagga
ttgtttcgaggccgaggagagcatccaaagatgggaaagctgaaaaagaggattcggcct
cgtgatattacaattaatataggaaaagatgcaccaattccagaatgtccaatacctggt
gaaaggtggaaagaaataaaacatgataacactgtcacatggttagcattctggaatgat
cccataaatccaaaagagttcaagtatgtctttttggcagcaagcagttcattaaaaggg
caaagtgacagggagaaatatgagaaagccaggctattgaaggattatatacataacatt
cgagcaaactatacaagggactttgccagtaaagatccaacaaaacagcagatagcagtg
gcaacttaccttatcgataagctagcacttagagctggcaatgaaaaggatgatgatgag
gctgatactgttggttgctgcactctaaaggtggagaatgttgagttggtccctccaaac
atgttaaagtttgacttcctaggtaaagattctatcagatacttaaataccgtggaggtt
gaactgcctgtctataaagcaattggagaattccaaactgctaaaaagagtgatggaggt
agaaagggtaagggtgatgatctctttgacttgctggacacaagcaaactcaatgcacat
ttgaaggaactcatgcctggtcttaccgccaaggttttccgtacatacaatgcttcaatt
accttggatgatatattgaataaagaaaccaaggatggctctgttcctgaaaagattgct
gtctatcagcacgcaaacaaagaggttgcaattatatgcaatcatcagcgcagtgtctcg
aagtcccatgaaaaccaaatgtctaggctgaacgagaagataaatgatttaaaggcccag
cgggatgaattgaagatggatttgagtagggccaggaaagggaagcctccactcaaggat
aaagaagggaagacaaagaagaacttgtcccctgaagtgatagaaaagaagctctctcag
gttgatgcaaaaatagagaaacttgagttggataaacaaataaaagaggatctgaaaact
gttgcacttggaacatcaaaaattaattaccttgatcccagaatatcagttgcatggtgc
aagcgccatgaagttcccatcgagaagatattcaacaagtcattacttgcaaaattcgcc
tgggcaatggacgtcgagcccaacttcagattttaa
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