Musa acuminata (dessert banana): 103990477
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Entry
103990477 CDS
T03447
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103990477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103990477
03036 Chromosome and associated proteins [BR:
mus03036
]
103990477
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103990477
Coactivators
SAGA/TFTC/STAGA complex
103990477
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103990477
STAGA complex
103990477
TFTC complex
103990477
SAGA complex
103990477
SLIK complex
103990477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
103990477
NCBI-ProteinID:
XP_064972438
LinkDB
All DBs
Position
BXJ2-7:4754225..4760745
Genome browser
AA seq
521 aa
AA seq
DB search
MSIVPKETIAVIAQSIGIANLSSDVALALAPDVEYRLREIMQEAIKCMRHSKRTVLTAED
VNSALSLRNVEPIYGFASGDPLRFKRAVGHKDLFYIDDRDVDFKEVIDAPLPKAPLDTAV
VAHWLAIEGVQPAIPENAPVEAIVAPSENKKSENSKEDGLLVDLKLPVKHVLSRELQLYF
DKITELTVTRPESILCKEALVSLAVDSGIHPLVPYFSYFIADEVARSLNDLPILFALMRV
VRSLLQNPHIHIEPYLHQLMPSIITCVVAKRLGSKITDNHWELRDFSANLAASVCKRYGH
VYHNLQSRLTKTLINAFLDPSKALTQHYGAIQGLAALGTSVVRLLVLPNLEPYLQLLHPE
MQLEKQKNEMKRKEAWRVYGALLRAAGKCLYDRLKLFPGLLSPPRHPGWRINGRVATSHS
NKRMSSTNLSSQQPPFKKVAADGPTGAMQPIAMTANLQGAPDGFPTRSSGKGGSVAPKGS
AVLAQAWKEDLEAGRLLASLFQLFGEGVFSFIQPVEMSFFI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagttccgaaggagacgatcgcggtgattgcgcaaagcatcggcatcgccaac
ctctcctccgatgttgccctcgccctcgcccccgacgtcgaataccgcctccgtgagatc
atgcaggaggcgatcaagtgcatgcgccactcaaagaggacagtcttgacggcggaggat
gtgaacagcgcgcttagtctgaggaacgtcgagcctatttatggatttgcatctggggat
cctttgcggttcaaaagggctgtagggcacaaggatcttttctatattgatgacagagat
gtagatttcaaggaggtcattgatgcacccttacccaaagcaccacttgatactgctgtt
gtggctcactggcttgctattgaaggggtccaacctgcgattccagaaaatgctcccgtt
gaagcaattgtagccccgtcagaaaacaaaaagtctgagaacagcaaggaagacgggctt
cttgttgatcttaaacttcctgttaagcacgtactatctagagaactccagctctacttt
gacaaaatcactgagcttacagtgactaggcctgagtccatcctttgcaaagaagcatta
gtgagtttagcagtggattcaggaattcatccattagttccatacttttcatacttcatt
gcagacgaggttgcccgaagcttaaatgatcttcctatcttgtttgctttaatgcgtgtg
gtccggagccttctccaaaatccacacattcacatagagccatatttacatcagctgatg
ccatcgattataacatgtgttgttgccaaaaggttggggagtaaaataacagataatcac
tgggaactgagagacttctcagcaaatctagctgcatcagtatgcaaaagatatggtcat
gtgtatcacaatctgcagtcccggttgacaaaaacgctgatcaatgcttttctggatcca
tctaaagcactgacacaacattatggtgccattcaagggcttgctgcattgggaactagt
gtggtacgtctgctagttctgcctaaccttgagccatacctgcaacttctacatccagag
atgcaactggaaaagcagaagaatgagatgaaaagaaaagaagcttggcgagtatatggt
gccttactgcgtgctgcaggtaaatgtttgtatgaccggctcaagttgttcccaggtttg
ttatctcctccaagacatccaggttggaggattaatgggagagttgcaactagccattcc
aacaagcgcatgtcaagcaccaacctctcatcacagcagccaccattcaagaaggttgca
gctgatggacctacaggtgcaatgcaacccattgccatgacagccaacctgcagggtgca
ccggatggattccctacacggtcatctggaaagggtggcagcgtggcgccgaagggatct
gctgtcttggcccaggcttggaaagaggatctggaagcgggacgtcttttggcatctcta
tttcagttgtttggtgaaggtgtattctcattcattcagccagtagagatgtctttcttt
atctag
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