Musa acuminata (dessert banana): 103990505
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Entry
103990505 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
103990505
03036 Chromosome and associated proteins [BR:
mus03036
]
103990505
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103990505
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
Helicases
103990505
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103990505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
DTHCT
CMS1
Motif
Other DBs
NCBI-GeneID:
103990505
NCBI-ProteinID:
XP_009407947
UniProt:
A0A804JSP6
LinkDB
All DBs
Position
BXJ2-7:complement(4539118..4544799)
Genome browser
AA seq
717 aa
AA seq
DB search
MPSLVLSDHLLSSEETKKLKPKELQNGIPEEGEQRKKKKKKKHAEIESTYGELDSSMEDM
ASEKKAKKGKKRKASDDDEKSDTTSDSTQPTVAEKQAAAVNGGAMKKPKLMKDDDGETDN
AADDPNALSNFRISNVLRETLNSKGIKALFPIQAMTFDLILDGFDLVGRARTGQGKTLAF
VLPILESLTNGVHKASRKSGYGRSPSVLVLLPTRELANQVYSDFEAYGGTVGLSSCCLYG
GSPYRTQEILLRRGVDIIVGTPGRIKDHIERGNLDLKALKFRVLDEADEMLNMGFVDDVE
LILGKVEDTSKVQTLLFSATLPDWVKKISTRFLKQDKKTADLVGNEKLKASANVRHLVLP
CTRSARPQLIPDIIRCYSRGGRTIIFTETKESASELAGLLPGARALHGDIMQAQREVILA
GFRSGRFLVLVATNVAARGLDINDVQLIIQCEPPHDVEAYIHRSGRTGRAGNTGVAILLY
EPKHSFSVSRIERESGVKFEHISAPQPADIAESAGSEAADAISNVSDSVIPIFRSQAEQL
LSSSELSAVDLLAKALAKAVGFTDIKKRSLLSSMENYVTLLLQTGKIIYSPSFAFSTFRR
FLPDEKIEGVKGLSLTADGTGAVFDVPADDVNAFLEGQENAQSVSIEVLEKLPPLQDTDR
SKRGNSGRGRFGGGRFSGGRGGNSSSNRRNGGGGFIGRGRGRGKASSGGRNRFNRWK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctcgtcttatccgaccatcttctctcctccgaggagaccaagaaattgaag
cccaaggagctccagaacggcatccctgaggagggggagcagaggaagaagaagaagaag
aaaaagcatgcggagatcgagtctacatacggcgagctcgatagcagcatggaggatatg
gcgtccgagaagaaggcaaagaagggcaagaagagaaaggcctctgatgatgacgaaaaa
agtgacaccacgtccgattccacccagccgaccgtcgccgagaagcaagcagcggcagtg
aatgggggcgcaatgaagaagccgaagctgatgaaggacgatgacggagagacagacaac
gctgccgatgatccaaatgctttgtccaattttaggatctcgaacgtcttgagggagact
ctgaattcgaaggggattaaggctctgttccccatccaggccatgactttcgatctcata
ctcgatgggtttgatttggtcggtcgagcacggactggtcagggtaaaaccttggctttt
gtgttgcctatattggagtcactgaccaatggagtgcataaggcatcaaggaagagtggt
tatgggagatctccaagtgttttggtacttcttccaactcgtgagctggcaaatcaggtt
tattcagactttgaggcctatggtgggacagtaggtttatcttcatgctgtttatacggt
ggatccccttaccgtactcaagaaattttactaaggcgaggagttgatatcattgttggg
actcccggacgcataaaagatcacattgaaagggggaaccttgacctgaaggctttaaag
ttccgtgtccttgatgaagcagatgaaatgttaaatatgggttttgtcgatgatgtggaa
ctaattcttggtaaagttgaggatactagcaaagttcaaacacttctcttcagtgctacc
ctgcctgactgggtaaagaagatatctacacgatttctaaagcaagataagaaaacagct
gatcttgttggcaatgagaaattgaaggctagcgccaatgttagacatcttgttcttcct
tgtactcgttcagcaagaccacaacttattcccgatattatccgttgttatagccgtggt
ggccgaaccatcattttcaccgagacaaaagaatctgcatctgaacttgctgggttatta
cctggtgcacgtgctttgcatggggacataatgcaagcacaacgtgaggtcatacttgct
ggatttaggtcaggcaggtttttagttttagttgctacaaatgtggcagcacgtggctta
gacataaatgatgtgcagttgattatacagtgcgaacccccacatgatgttgaagcttac
attcatcgatcagggcgaactggaagagctggaaatactggtgttgctattttgctttat
gaacccaaacactcgtttagtgtttctagaatagagagagagtcaggtgttaagtttgag
catatatctgcccctcagcctgctgatattgctgaatcagctggatctgaagcagctgat
gctatttcaaatgtctccgacagtgttattccaatttttcgttcacaagcagagcagctg
ttaagctcctctgaattatcagcagtggatttactagcaaaagcccttgccaaggctgtt
ggtttcactgacataaaaaagaggtcacttctctcttctatggagaattacgtgacatta
cttcttcagacaggaaagataatctattcaccttcgtttgcttttagtacgttcagaaga
ttcttgcctgatgagaagattgaaggtgttaaaggcctttctcttactgctgatggcaca
ggtgcagtgtttgatgtgcctgctgatgatgtaaatgcatttcttgaaggccaagaaaat
gctcagtcggtgtccattgaggtcctggaaaaattgccccctttgcaagacacagatcgg
tcgaaacgtggtaactcgggccgaggaaggtttggcggtggcagattctctggtggtaga
ggtggcaacagcagttcaaatagaagaaacggtggtggtggtttcatcggtagaggccgt
ggccgaggaaaagctagtagtggtggtcgtaacagatttaacaggtggaagtga
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