Musa acuminata (dessert banana): 103990580
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Entry
103990580 CDS
T03447
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03420
Nucleotide excision repair
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103990580
09124 Replication and repair
03420 Nucleotide excision repair
103990580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mus03051
]
103990580
03400 DNA repair and recombination proteins [BR:
mus03400
]
103990580
Proteasome [BR:
mus03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103990580
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103990580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
TECR_N
Ubiquitin_2
UBA_3
Ubiquitin_4
Dsc3_N
UBA_Ucp12
Motif
Other DBs
NCBI-GeneID:
103990580
NCBI-ProteinID:
XP_064972268
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Position
BXJ2-7:3982505..3990195
Genome browser
AA seq
388 aa
AA seq
DB search
MKLTVKTLKGTHFEIRVQPNDTIMAVKKNIEQIQGKDSYPWGQQLLIHNGKVLKDETTLE
ENKVKEDGFLVVMLSKSKAAGSSGSSSAQPSATSAVQHPTPKEAPTQVPVQAPPQVAAQA
APPTPVPVSSSIGSQGSNLEVSADTYGQAASNLIAGSNLEQMVSQLLEMGGGNWDRDTVL
LALRAAYNNPERAVEYLYSGIPATTEIAVPVDPFPLSQASSQGANPTDATAPGFLSGLPN
SAPLNMFPQGNTNPGVGAGGGSLDFLRNNPQFLALRAMVQANPQILQPMLQELSKQNPQL
LRLIQEHHAEFLQLINEPIEGLEGDMFDQPEQDEMPHTINVTAEEQEAIGRLEAMGFDRA
SVIEAFLACDRNEQLAANYLLEHAGDED
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggtgaagacgctgaagggcacccacttcgaaatccgggttcagcccaac
gatacgattatggccgtgaagaaaaatattgagcaaatacaaggaaaagacagttatccg
tgggggcaacagttgttgattcacaatggaaaagttttgaaagatgaaaccacattggaa
gagaacaaagttaaagaagatggttttcttgttgtcatgcttagcaagagtaaagctgca
ggatctagtggatcttcgtcagcccagccttcggcgacttctgcagtccagcatcctact
cctaaagaagccccaacccaagttccagtacaagctccaccacaagtagcagcacaagct
gcaccaccaactccagtcccagtgagttcttcaattggatctcaaggatcaaacttggag
gtatctgctgatacctatggtcaagctgcatccaatttaattgcagggagtaatcttgag
cagatggttagtcaattgctggagatgggtggtggcaactgggatagagacacagttctt
cttgcacttcgtgctgcttacaacaacccagagcgtgctgtggaatacttatactctggt
attccagcaacaacagaaattgcagttccagttgatcccttccctttgtctcaggcatct
agtcaaggggccaacccaactgatgcaactgctccaggatttctgtctggacttcctaat
tctgctccattgaatatgttcccacagggtaatactaatcctggagtgggtgctggaggt
ggatctctggacttccttagaaataatccacagttcttagccttgcgagcaatggttcaa
gcaaatccacagattttgcagccaatgcttcaggaactaagcaagcaaaaccctcaactt
ttaagactaatacaggagcatcacgcagagtttcttcagttaataaatgaacctattgaa
ggccttgaaggggatatgtttgatcagcctgagcaagatgagatgccacataccataaat
gtgacagcagaagagcaggaggcaattggacgacttgaagcaatgggttttgaccgagca
agcgttatcgaagcattcttagcttgcgacaggaacgagcagttggctgcaaactattta
ttggagcacgccggtgatgaggattga
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