Musa acuminata (dessert banana): 103990658
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Entry
103990658 CDS
T03447
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
103990658
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103990658
BRITE hierarchy
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GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo
Topoisom_bac
Motif
Other DBs
NCBI-GeneID:
103990658
NCBI-ProteinID:
XP_009408142
UniProt:
A0A804JS43
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Position
BXJ2-7:complement(3462939..3473288)
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AA seq
551 aa
AA seq
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MGVKNLWDILESCKKTLPLHHLQNRRLCVDLSCWLIQFQNAGRLPACSKEKIYLRNLFHR
LRALISLNCSLILVTDGSIPSIKLSTYRRRLGLCEVIQYDTNSQPMPSVSLRRNMGSEFS
CMIKEAKVLGTALGVPFLDGLEEAEAQCALLNVESLCDGCFSTDSDIFLFGARTVYRDIF
LGEGSYVTCYEMEDIERQLGFGRNSLISLALLLGSDYSQRVHGFGPESACRIVKSLGDDS
VLHQFISEGLKIARVYKGRKKITKELRSNVNNENKHGNQQSVCAEAQNAESDGQYLDVIN
AFLKPKCHSADSEAVKRVCTQHPFQRVQLHHVCEKYFGWSPDKTDQYILPKIAERDLRRF
ANLRSTSSELGARIPLHMMPVPCPVSAIVKLRKVQGQDHYEVSWQGIDGLGNSIVPADLI
ESACPERIAEYVEKKAEVKQQNRKPRRLTKALVNQIDLQLQGLLLSIESQSKTLPETANC
LPPPSAAPEVIDLCSPSPPLRACQVAKYQKSIDMHVNVIDIHESDNDASPEHERKTRELR
LFIDSIREDLY
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcaagaacttgtgggacatcttggaatcgtgcaagaaaaccctcccccttcac
caccttcagaacaggaggctgtgcgtggatctctcttgctggctgatccagttccagaat
gccggacgcttgccggcatgctcgaaggagaagatctatcttcgcaatctcttccaccgt
ctcagagccctaatatccctcaactgtagcctcatcctagtcacagatgggtcaattcct
tccattaaattgtccacttatagacggcggttgggtttgtgtgaggttatacaatacgac
acaaactcccaaccgatgccatcagtttcgctccgtagaaacatgggttctgaattctca
tgtatgataaaggaagcaaaagttcttggaacagctcttggggtccccttcttagatgga
ctagaggaagccgaagcacaatgtgcattgctgaatgttgaatccttatgtgatggatgc
ttcagtactgattctgatatattcctttttggagctaggacagtatatagagatattttt
cttggagagggaagctatgttacctgttatgaaatggaagacatagagcgacaacttgga
tttggaaggaattcgctgatttctctcgctcttctactcggcagtgactattctcagaga
gttcatgggtttgggcctgaatcagcatgccggattgttaaatctcttggagatgactct
gtcctccatcaatttatttctgagggattgaagatagcaagagtttataaaggaagaaag
aagataacaaaggaacttaggtctaatgtgaacaatgagaacaaacatggcaaccaacaa
agtgtttgtgcagaagcacagaatgcagaatcagatggtcaatacctggatgttatcaat
gcttttctgaagccaaaatgtcattcagctgattctgaagcagtgaaaagggtttgcacc
caacatcctttccaacgtgtgcaacttcatcatgtctgtgagaagtattttggttggagc
cctgataaaacagaccaatatatcctccccaagattgctgaaagagatcttaggcggttt
gctaatctacgttccacatcatctgagttaggagcaagaattcctttacacatgatgcca
gttccttgccctgtctctgctatagtaaaactgagaaaagtgcaaggacaggaccactat
gaggtttcttggcaaggcattgatgggctcgggaactccattgtccctgctgatttgatt
gagagtgcttgcccggaaagaattgctgaatacgtggaaaagaaagctgaagtaaagcag
cagaatagaaagccaagaagattgactaaagctctggtaaatcagatcgatctccagctc
caaggcctgttgctcagtatcgaatcacaaagtaaaacccttcctgaaacagccaattgt
ctgccaccaccgagtgcagcccctgaggtcatcgacctctgcagtccttccccaccactc
cgcgcctgtcaggttgccaaataccagaagtctattgacatgcatgtgaatgtaatcgac
atacacgagtcagacaatgatgcatcccctgagcatgagaggaagacaagagagcttaga
ttatttatcgacagtattagagaagatctttattag
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