Musa acuminata (dessert banana): 103990790
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Entry
103990790 CDS
T03447
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103990790
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103990790
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
103990790
NCBI-ProteinID:
XP_009408329
UniProt:
A0A804JRI4
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Position
BXJ2-7:complement(2414948..2430877)
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AA seq
1178 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILCPDVPIALRLSSHLL
LGVVRIYSRKVNYLFHDCSEALLKIKQAFRSAAVDLPPEESTAPYHSITLPETFHLDDFE
LPDSGDFVDHHVSTKEQITLQDTVGGMEFSSMQFGSDERFGDGIDSQIGLDIDELQDLFL
DKHPSHEHTSVAGSDERGMLQGQSSSSMLVTEMGIDKDQGGSVKGYNIQTSNLNEAFSPN
DHNVDQIGHSSIADVPNLESTYCAHAPLTPGLMGEAISTPIPESPALSPHIKHSPSFGEE
DLKTDGGLIHMSTMEPELAHVPQVVSSPTVLLEEAQQIAGLGEHCEQESTDDFQIKFVAE
EAKDLSCDDQNLDNGENTFPDISQMEGLVSSSCSLEASNSEVPQDKSPVETGVVTATSEA
STENLLAPAVTSATKISSLGVEAQPSSNQDLEVVVDPCPQTSLHLRASSSESNQANTHSL
ENLEPVQDAPEASLEDLCVPSQMPVREKALHSIECIENQGSVPVVGNTNEISVDLSSKDT
ELDRLNCSSSPEKMLLAPTSDVDQAKELSQLTVDKGVTESDGSVGRISSLSGRKRHLIDS
ALVLPNGSSAKMSGRKPFRRSTESIPDDDDLLASILVGKRTPLLRIGPTPPLPKATSLKR
PRAMPKLGMLKKVLLDDITVLHADAIRQQLMHTEDIRRVRRKAPCTHPEIWMIQKSSADD
EIFIEPITTGMSVELSALHSQVYDYVADHLNSCAELLKESNYSRRSGIIREADEKETADP
TVPNSTGFGRQESPGVSVSTEVGSSMIAYNSDAQEHLQSRAGLPQLEALGNNTPCTVVTT
DINERERNDKAPADGLATGENDPEGRSVDKKMPAVLDSDTMIDVEVECAATDASAMEERG
LVDVVIPSDPQDVCFEIENECSHSLVSTLDSCLPQVDENLPEGRLTVMLDVSSSQDMIQE
VGEPTDEAMQEKEGQLGNRLENEAIAHIVMDNKEVSIPDISFSEGSEIAGVSSLKPNSDI
QNIPSLVGENSCLLEFNLAGSGESPVDFNTAKECSDFCSAIGGNGTEFLNADDEADYNEE
ADDALNPEEAQSLENSGWSSRTRGVARYLKNLFEGESGRVRKSLAMDHIVAGRSRKEASR
MFFETLVLKTKDYIHVEQENPFSYVNIEPRSKLLKSEF
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgttctattctcagtttattttggccaagaaggggccgctagggaccatatggattgcg
gcgcatttggaacggaagctgaggaagaatcaggtggccgatactgatattggtgtctct
gtagattcaattctttgtcctgatgtcccaattgcacttcggttatctagccatcttctg
ctaggtgtggtgagaatatattctaggaaggtgaactatctcttccatgattgcagtgag
gctttgctcaagataaaacaggccttcagatcagcagcagtagatcttcccccagaagaa
tcaactgctccttatcattcaataaccttacctgaaacttttcatctcgatgattttgag
ctgcctgatagtggtgactttgttgaccaccatgtcagtacaaaagaacagattacactt
caagatactgttggtggcatggagttttcatctatgcaatttggatctgatgaaagattt
ggtgatggaattgattctcagattggcttagacattgatgaattgcaggacttgttctta
gataagcatccctcgcatgagcatacttcagttgcaggctcagacgagcgcggcatgctt
cagggtcaatcttcatcttccatgcttgtcacagagatgggtattgataaagaccaagga
ggttctgttaaaggctacaacatccagacttctaatctcaatgaagcattttcccccaac
gatcataatgttgaccaaattggtcatagttctattgctgatgttccaaatctggaatca
acatattgtgctcatgctccacttactcctggattgatgggagaggctatttcaacccct
atacctgaaagtcctgctctgagtccccacataaaacattcaccttcatttggtgaagaa
gacttgaagactgatggtggcctcatacacatgtcaacgatggagcctgagttagcacat
gttccacaagtggtatcctctcctacagttttgttggaagaagcacaacaaatagctgga
ctgggtgagcattgtgaacaggagagcacagacgattttcagattaaatttgttgcagaa
gaagcaaaagatctgtcatgtgacgatcagaaccttgataatggagagaacacatttcct
gatatatctcagatggagggcttggtatcttccagttgttctttagaagcatctaattct
gaagttcctcaagacaagtctccagttgagactggagttgtaaccgcaacttctgaagca
tcaactgaaaatctattggcacctgcagtgacctcagctaccaaaattagttcacttggg
gttgaagctcagccatcaagtaatcaagaccttgaagtagttgttgacccttgcccacaa
acaagtcttcatttgagagcttctagttcagaatcaaatcaagcgaacacacattcttta
gagaatttagaaccagtacaagatgctccagaagcttctcttgaagatctttgtgtccct
tcacaaatgccagtgagagagaaggcactgcatagtattgaatgtatcgagaatcaagga
tctgtccctgtagttggcaacacaaatgagatatctgttgacctttcttcgaaagatact
gagttggatcggttgaactgttcttcaagtcctgaaaagatgcttttagctccgacaagt
gatgttgaccaggcaaaagaattaagtcagctaactgtagataagggagttaccgagtct
gatggaagcgttggcagaatttccagtctctctggtaggaaacgccacctaatagacagt
gcactagttctgccaaatggtagttcagccaaaatgtctggcagaaaaccatttagaaga
agcacagaatctattcctgatgatgatgatttgttagcatctatattagtaggaaagagg
actccactcttgaggattggtcccactccacctctgccaaaagcaacttctctaaaacgg
cctagagcaatgcccaaattaggcatgctgaagaaagtgctgttggatgatattacagtc
ttacatgctgatgcaattcggcaacagctaatgcacactgaagatatacgacgcgtacga
aggaaagcaccctgtacacatcctgaaatttggatgattcagaaaagttctgcagatgat
gaaattttcattgaacctattactactggtatgtctgtggagttgagtgccctgcactct
caagtatacgattatgtagcagaccacctcaattcttgtgcagagctgttgaaagaatcc
aactattctagaaggtcaggcatcatcagggaagctgatgagaaagaaacagctgatcca
acagtgccaaatagcactggttttggaaggcaggaatcacctggtgtatctgtgtcaact
gaagttgggagtagcatgattgcttataacagtgatgctcaagaacatttacaatcccga
gctggcctacctcaacttgaggctttaggcaataatacaccatgtacagtggtaacaaca
gatataaatgaacgggaaagaaatgataaagctcccgctgatggcttagctactggtgag
aatgaccctgaaggtaggtcagttgataagaaaatgcctgcagttttggatagtgatacc
atgatcgatgttgaagttgaatgtgctgctacagatgcatcagccatggaggagaggggt
ttggtggatgtggtaattccaagtgaccctcaagatgtttgttttgaaatagagaatgaa
tgtagtcattcgttggtctctacactagatagctgtttacctcaagttgatgaaaatttg
ccagaaggcagattaactgtcatgctggatgtgagttcttcccaggatatgatccaggaa
gttggtgaaccaactgacgaggctatgcaggaaaaagaaggccaacttggtaacagactg
gagaatgaagctattgcacacatagttatggataataaagaagtttctattcccgatatt
agcttttcagaaggatctgagatagctggtgtatcctcgctcaaaccaaatagtgacatc
caaaatattccttcattagtgggagaaaattcttgtttgctggaatttaaccttgccggc
agtggagaaagccccgtggacttcaacactgcaaaagagtgtagtgacttttgcagtgca
attggtggcaatggtacagagtttcttaatgcagatgatgaagcagactataatgaagaa
gcagatgatgcactgaatcctgaagaggcccaatcacttgaaaatagcggttggtcttcc
aggacaagaggtgttgcgagatacttaaaaaatttgttcgagggagaatccggacgtgtg
agaaaaagccttgctatggaccacatcgtagctggaagaagtcgcaaagaagcatcaagg
atgttctttgagactttggtcctgaaaacaaaggattatatacatgttgaacaggagaac
cctttttcgtatgtcaacatagaacctagatcgaagctcctcaagtcggagttctaa
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