Musa acuminata (dessert banana): 103991568
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Entry
103991568 CDS
T03447
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103991568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
103991568
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103991568
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
103991568
NCBI-ProteinID:
XP_064973182
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Position
BXJ2-7:complement(10265293..10282384)
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AA seq
1145 aa
AA seq
DB search
MQKRQTSILAFLKKPSAENRRCDGPSPLSDVLPGPHFGSAGAEKPSDEPFPEIRGTDTPP
EKPCCQIFPAGAPEIKGDDSRSASPFSSVMRKFVKEDKSEGFRKGNQEGSGSFICHSKSN
SAEKSRVRNEMPSDEHSKTHTSIFKEECDGMDLHFGPDSDVLGPETPATRPLVPRLKRVQ
DGLTDFNDKQSSLLVGSGKRLKSDFDSVVGKHIQEEVCESASSKFDWLNPSNIRDANGRR
PSDPLYDKRTLYIPPDALKKMSASQRQYWSVKCQYMDVVLFFKVGKFYELYELDAEIGQR
ELDWKMTISGVGKCRQVGISEAGIDDAVLKLTARGYKVGRMEQLETSEQAKARGATSVIQ
RKLVSVSTPCTPIDGSIGLEAVHLLALKEQDRGSRNGSTIYGFAFLDYAALKFWVGSICD
ENSAALGALLMQISPREIIYERSGLSKETHMTLTKYASAGSMKTQLTPTTPNADFLAASE
IMKLINSRGYFKGSSSSWSSAFDYSVNHDLILCALGGLIDHLSRLMLDDTLRNGELLPYH
VYRNCLRMDGQTLLNLEIFSNNIDGSLSGTLYKHLDHCITASGKRLLRRWICHPLKDVTD
VNHRLNIVDGFIKHSGIISIIVGYLHRLPDLERLLGRVRSTVGSSSTLLLPFVGERVLKQ
RVKAFGSLVKGLRIGIDLLNALEKEDHGIISLLKVVNLPTLSGLDELLHQFEVALDDDFP
RYQDHKVKDSDAETLAVLVELFSGKATEWSHIINALNRIDVLQAFATVTVSSCRPMSRPT
FSEANSYSTNLHQDDAGPILHMKGLWHPYAVADNGNGLVPNDIYLGEDSMACHPRALLLT
GPNMGGKSTLLRATCLAVILAQLGCYVPCEVCLLSPVDTIFTRLGATDRIMSGESTFFVE
CSETASVLRNATKDSLVLLDELGRGTSTFDGYAIAYSVFRHLVEKICCRLLFATHYHPLT
KEFASHPHVSLQHMACAFRPKDGISYNGDQDLIFLYKLAAGACPESYGLQVALMAGLPRP
VVQAAGCASQKMKLTISQNFKSSEGRSQFSTLHEEWLKTLLDISKLSISGWNEDASDTLL
CLWHEVRSFYKPASTEQRGRDIIHRDACVYSTTWLILTRSPKKKFVPHCLVSPQRLFLSI
FSSAG
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcggcaaacgtccatcctcgccttcctcaaaaaaccctcggcggagaaccga
aggtgcgacggcccttcgcccttgtccgacgttctgccaggcccgcatttcggctccgcg
ggggcagagaagccctccgatgaaccctttccagagattcgaggaacggacactccgccc
gagaagccctgctgccaaatcttcccggcaggggccccggagatcaaaggcgatgacagc
cgcagcgctagccctttttcgagtgtcatgcgcaagttcgtgaaagaagacaaatccgag
ggcttcagaaaggggaaccaagagggcagtggttcctttatatgtcactctaaatctaat
tctgctgaaaaaagtcgtgtgagaaatgaaatgccttctgatgagcactcaaaaacacat
acttcaatatttaaagaagagtgtgatggaatggatctgcattttggacctgattcagat
gttctgggaccagaaactccagctacacgcccactcgttcctcgtcttaagcgagttcag
gatggtctgactgattttaatgacaagcagagttctcttcttgttggttctggcaaaagg
ttgaagtcagattttgactcagttgttggaaagcacattcaggaagaagtatgtgaaagt
gcaagcagcaagtttgactggctcaatccttccaatattagggatgcgaatggaagacga
ccaagtgacccactatatgacaagagaaccctgtacattccacctgatgcactgaagaaa
atgtccgcatctcaaaggcagtattggagtgtcaaatgtcaatatatggatgttgtcctc
ttttttaaagtgggcaagttctatgagctatatgagttagatgctgagattggacaaaga
gagcttgattggaaaatgaccattagtggtgttggtaaatgcagacaggttggtatttct
gaggctgggatagatgatgctgtcttgaaactcacagctagggggtataaagttggacga
atggaacagcttgaaacctcagagcaagctaaagctagaggagcaacttctgtcattcaa
agaaagcttgttagtgtatccactccatgtactccgattgatggtagtattggactagaa
gcagtccaccttcttgctttgaaagagcaagaccgtggctctagaaatggttctaccatt
tatggatttgctttccttgattatgctgctttgaagttttgggtgggttccatttgtgat
gaaaactctgcagcattgggtgctttgctgatgcaaatttcgccaagggagattatctat
gaaagatcaggactttccaaagagactcacatgacactaacaaaatatgcttcagcaggt
tcgatgaaaacacaattgactcccacaacacccaatgcagattttcttgcggcctctgaa
attatgaaattgattaattctagaggatacttcaaaggatcttctagttcatggtcttcg
gcgttcgactattctgtgaaccatgatctcattttgtgtgctcttgggggactcattgat
cacttgtcaaggctaatgcttgatgatactttacgtaatggagaacttttaccttaccat
gtatatagaaattgtctgaggatggatggccagacactgcttaatcttgagattttcagc
aataatattgatggtagcttgtcaggcacactgtacaagcatcttgatcactgcataact
gcatctggtaagcggcttttgagaagatggatctgccatccactcaaagatgttactgat
gtcaatcataggctcaacattgtggacggatttataaagcattcagggattatttccatc
atagttgggtatctacataggcttccagatcttgagcgattactaggacgagttagatcc
actgttggttcttcatctacacttcttttgccatttgttggagaaagagtactgaagcag
cgggtgaaagcatttgggtctcttgttaaaggccttcgaattggaatagacttgttaaat
gccttagaaaaagaagatcatggtataatatcattattgaaggttgtcaatcttccaaca
ctcagtggccttgatgaactacttcaccagtttgaagtagctttggatgatgactttccg
cgttaccaggatcacaaagtgaaagactcagatgcagaaacattggctgttctagttgag
cttttctctgggaaagctactgagtggtctcatatcataaatgcactcaaccgtatcgat
gtgctacaagctttcgctaccgtcacagtttcatcatgtaggcccatgagcaggcctact
ttttcagaagctaattcttattcaacaaatctacaccaagatgatgcaggaccaatactt
cacatgaagggtttatggcatccctatgctgttgcagacaatgggaatggtctggttccc
aatgacatatatcttggtgaagactccatggcttgccatcctcgtgcactgctgttgact
ggacccaatatgggtggaaaatcaactttactgcgagctacttgtctagctgtcatattg
gcccagctgggctgctatgtaccttgtgaagtatgtctgttgtctcctgttgatactatt
tttacacgactcggtgcaactgatagaatcatgtctggcgaaagtacattctttgttgaa
tgctcagaaactgcatcagttcttcgcaatgccaccaaagattctcttgttttgcttgat
gaactcggcagaggaacaagcacatttgatggatatgcaattgcttattctgtatttcgc
catcttgtggaaaagatttgctgtcgattgctctttgccacccattaccatccacttact
aaagaatttgcatctcatcctcatgtgagtctgcaacacatggcctgtgcttttaggcca
aaagatgggatctcttacaacggggaccaagaccttatctttctctacaaacttgctgct
ggagcttgccctgagagttatgggctacaagtagctttaatggcaggccttcccagacca
gttgtgcaagctgctggctgtgccagtcaaaaaatgaagctgacgattagtcagaatttc
aagtcaagtgaaggaagatcccagttttccactctgcatgaagaatggctgaagacactg
ctggatatttcaaaactcagcatcagtggttggaatgaagatgcatccgatacattgctt
tgtttgtggcacgaagtaaggagtttttacaaaccagcatctactgaacaaaggggacgt
gatattatacaccgagatgcatgtgtatattctacaacatggttgatcctaactcgttca
ccaaaaaagaagtttgttccacattgtctggtatctcctcaacgtctttttttgtctatt
ttctcatcagctggctag
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