Musa acuminata (dessert banana): 103992743
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Entry
103992743 CDS
T03447
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103992743
Transcription machinery [BR:
mus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103992743
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
Motif
Other DBs
NCBI-GeneID:
103992743
NCBI-ProteinID:
XP_009410848
UniProt:
A0A804JZZ2
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Position
BXJ2-7:complement(36114444..36118439)
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AA seq
505 aa
AA seq
DB search
MGVVAVPSSASRSPFGSGLAVRRSSPLRRPFFFLAFKGGPGPKCSALVTPPEAVTQEAVK
EPKKSPARAAKRSKRGKAVAVVAAPTTADPSDACPRDPDYSEVAAALENIYKLSPADVSD
GEESGRQTVVKDGSLGVDNVVRNRKKRVKRLGLEERISMRRRPKEEAGTEARRGEGREFD
EDVEILVREYSGSTNLDSLDWKRMKIPPVLSSAEHTWLFKLMQPMKAILQVKEGMYKDLN
REPTDGELADAVNMSVPQLRRHIEVARAARDKLIKHNLRLVLFVINKYYPEIASGQKFQE
FCQAGAKGLITAIDRFEPKRGFRLSTYSLFWIRHSIIRSMTLSSFTKVPFGIESVRQEIK
KAKLELSFELGRLPTEEEIVDRVGISLERYNEVMKASKPVLSLNARHVVTQEEFINGITD
IDVGGDKRRQPAVLRLALDDVLDSLRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM
VRKHELKALLKLKHPTRVDYLRRYV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgtcgctgtgcccagctccgcctcccgatcgcccttcggcagcggcctcgcc
gtccgccggtcgtcgccgctccgccgacccttcttcttcttggccttcaagggcggcccc
ggccccaagtgctcggccttggtcacgccgccggaggccgtcacgcaggaggccgtgaag
gagccgaagaaaagcccagcgagagccgccaagcggtccaagagagggaaggccgtcgcc
gtcgtcgcggcccccacgaccgccgatccctccgatgcttgccctcgcgatccggactac
agcgaggttgccgccgccctcgagaacatctacaagctcagcccggccgatgtctcggac
ggggaggagagcggccgccagaccgtggtgaaagatgggagtttgggggtggacaatgtg
gtcaggaaccggaagaagagggtgaaaaggttgggtctcgaggaaaggatatccatgagg
cgcaggccgaaggaggaggcggggacggaagcaaggagaggcgaaggaagggagtttgat
gaggatgtggagatattagtcagggagtactccggctccaccaatttggacagtttggac
tggaagaggatgaagataccgccagttcttagctcggccgagcatacttggcttttcaag
ctgatgcaacccatgaaggcaatacttcaagtgaaggagggcatgtacaaggatctgaac
agggagccgaccgacggtgagctggcagatgcagttaacatgagtgttccacaattgaga
agacatatagaagttgctcgggcagcaagagacaagctaatcaagcacaaccttcggcta
gttttgtttgtaataaataagtattatccagagattgcaagcggccagaagttccaagaa
ttttgtcaagcgggagcaaagggtctcattactgccattgatcggtttgaaccaaagcgt
ggtttccgtctatccacatacagcctcttttggattcggcattctattattcgatcaatg
acactctcaagcttcacaaaagttccttttgggattgaatcggtcaggcaagaaattaaa
aaagccaaactagagctatcatttgagctgggaagattgcctaccgaagaagagatcgtg
gacagggttggaatatccttggaaagatataatgaagttatgaaggcatcaaaaccagta
ctctcactcaatgcacggcatgtggtaacacaagaagagtttatcaacggcatcactgat
attgatgtaggaggtgataaacgtagacagcctgcagtcctacgacttgctcttgatgat
gtgctggattcactaaggccgaaggagagcttggtaatcagacagaggtatgggcttgac
ggcaaaggtgataggactttgggagagattgcgggaaacctcaatatctccagagagatg
gtgcggaagcatgaactgaaggctctcctgaagctgaaacatccaactcgggttgactat
ctccgaagatatgtttga
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