Musa acuminata (dessert banana): 103994536
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Entry
103994536 CDS
T03447
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103994536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103994536
04121 Ubiquitin system [BR:
mus04121
]
103994536
03036 Chromosome and associated proteins [BR:
mus03036
]
103994536
03400 DNA repair and recombination proteins [BR:
mus03400
]
103994536
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103994536
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103994536
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103994536
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103994536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_6
zf-HC5HC2H
BRCT
zf-C3HC4_2
BRCT_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-HC5HC2H_2
zf-RING_5
PTCB-BRCT
RING_XB3-XBAT31
zf-RING_10
zf-rbx1
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
103994536
NCBI-ProteinID:
XP_018685928
LinkDB
All DBs
Position
BXJ2-8:10942714..10950733
Genome browser
AA seq
702 aa
AA seq
DB search
MIDSEDIVQIWSPFLDYLVKLELELKCSICTNLLKVPKVLPCDHVFCSGCISSLIDKGSV
CPSCDLPFLPKDIRLALHVERLVSIFQEMDDAIGTIVQRNASPLGSPGVRIPAKKNPVSV
NNHIEAKSIGVQHMPQEKSGHLHSHGSPSTGEGSNKTRHDGENQEIILVGSMNSEQKSGI
VPLDKGSPNCPSTFSENGDSNLDIHDRYSEHTTKKSPTKTIKADSYASHEVRRPQLSPSS
VTGHPIAKDDGKTAVGSSQTRAGVKKQKTSKRQKLNNKRVKNHTIQHVRTPSIVFGDECA
FCHSFRTTEASGPMCCYKDGRLVAMEEAGQSHVTHAHQKCIEWAPQIYFSGDTVKNLEVE
LRRASKIKCSKCGLKGAALGCYFGSCPKSFHVPCAVEISDCRWDCVNFHVLCPNHSSEKL
PCDDDGRLEKTSGTTHFPSIQIECRKSSGKLTEHQSSEHHAAAVGVKNDRIFIGSALMDS
EKELLVKFASLVGGTVTEMWRPDVTHVIASTNESSAYGRTHNVLMAILTGKWVLTTKWVK
VCMEAGHFVWEEPYQVRFDMHGFTDGPPMRGRLGAMEKAQKLFAGLSFRLSEHFTLSCRQ
SLKELVVTAGGVVLEDDILIPQDPFAIGFPALCFIYNEEPPQEYDRRGLAKVKDERCEEA
IDFFKKTGAQVRGHTRVLDAIAALDIRYLLMESAPKLDPDNT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattccgaggacatagttcaaatatggagtcccttcctcgattatctggtgaaa
ttggagttggagctcaagtgttccatctgtactaacttgcttaaggtgccgaaagtgttg
ccctgcgatcatgtgttttgcagtggttgtataagttctttgatcgacaagggttctgtt
tgtccttcctgtgacctgccttttcttcctaaagatataaggcttgctttacatgtggaa
aggcttgtgagcatttttcaagagatggatgatgctatcggcaccattgttcaaaggaat
gcatctcctcttggttcccctggtgtaaggatacctgccaaaaaaaacccagtctcagtc
aacaatcatatcgaagctaagtcaataggagtacaacatatgccccaagagaaatcgggc
catctccattcgcatggttctccatcgactggtgagggtagtaataaaactagacatgat
ggagaaaatcaggaaataattttagttggaagcatgaattcggagcaaaagtctggtata
gttcctttggacaaagggtcgcctaattgcccttcaacatttagcgagaatggggattct
aatttggacattcatgatagatattctgaacatactaccaagaagtcaccgacaaagact
atcaaagctgattcttatgcatcacatgaagttaggaggcctcaactctcaccttcctct
gttactgggcatcctatagcaaaagacgatggtaagacagctgtaggctcttctcaaacg
agagctggtgttaaaaaacaaaagacttccaagaggcagaagctaaacaataaacgtgtc
aaaaaccataccattcagcatgttcgtacacctagcattgtgtttggtgatgaatgtgca
ttttgccattccttcaggaccactgaggcgtctgggccaatgtgttgctacaaagatggt
agactcgtagctatggaggaagcaggccaatctcatgtgacacatgcacatcaaaagtgc
attgaatgggctccacagatatatttttctggcgatactgtaaagaatttggaggtggaa
cttagacgtgcctcaaagataaagtgcagcaaatgtgggctgaaaggtgctgctcttggt
tgttactttgggagctgtcctaaaagctttcatgtgccctgtgcagttgagatctctgat
tgtcgatgggattgcgtaaatttccatgtgttgtgccctaatcattcttcagaaaaattg
ccatgtgatgatgatgggcgacttgaaaaaacttctggaactacacattttccatcaatt
cagatagaatgtcgaaaatcttcggggaagctaacagaacatcaaagtagtgaacatcac
gcagctgctgttggtgttaaaaatgatagaatatttattggatctgctctcatggattca
gaaaaggagctactggtcaagtttgctagcttggttggtggaacagtgaccgaaatgtgg
agaccagatgtgacccatgtcattgcttcaaccaatgagagtagtgcatacggtagaacg
cacaatgtcctaatggctattttgacggggaaatgggttcttactacaaagtgggttaag
gtttgcatggaggctgggcattttgtttgggaagaaccctatcaagtccgctttgatatg
catggttttacagatgggccgcccatgagaggaaggcttggagcaatggagaaggcacaa
aagttgttcgcaggtctaagttttcgtctaagtgagcacttcactctctcatgcaggcag
tccctaaaagaacttgttgtcactgctggtggagttgtattagaggatgatatcttaatt
ccacaggacccttttgccataggatttccagctctctgttttatttacaatgaagaacct
ccacaagaatatgatcgaagaggtcttgcaaaggttaaagatgagagatgtgaagaggct
attgacttttttaagaagactggtgctcaagttagaggccacaccagggttttggatgct
attgctgctttggatatccgatatttgcttatggaaagtgcgcctaagttggatcctgat
aacacctaa
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