Musa acuminata (dessert banana): 103994979
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Entry
103994979 CDS
T03447
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
mus04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103994979
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103994979
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
103994979
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103994979
03036 Chromosome and associated proteins [BR:
mus03036
]
103994979
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103994979
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103994979
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103994979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
Phage_TAC_7
Phage_Inh_C
DUF4187
Motif
Other DBs
NCBI-GeneID:
103994979
NCBI-ProteinID:
XP_009413732
UniProt:
A0A804K6R1
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All DBs
Position
BXJ2-8:12372252..12393822
Genome browser
AA seq
541 aa
AA seq
DB search
MGTDTVRDMASLDPELLQLPEVSHLALKAKPKIAEELYFQWLSFPETGKLVKSLIEDAKS
GSPLNAVGSSSTSGAAATNSLPSMFPAGSAPPLSPRSTTGSPRFMKRSSGAGPSPFGSPL
KLVSEPVKEVIPQFYFQNGRPPPKALKEQCLSRIDHLFFGNMDGVQIQEFKTVTKEICKL
PSFLSSSLFRKIDVECTGIVTRDAFVEYWINSNMMTKDIATQIFTILKQADRKYLTQEDF
KPVLRELLATHPGLEFLQGTPEFQERYAETVIYRIFYYMNRSGNGQITLRELKRGDLIAA
MQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVER
IFSQVPRKFKSKADGKMGYEDFVYFILSEEDKSAEPSLEYWFKCIDLDGNGIITANEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENESYFTLRDLKGGKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDIWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggatacggtgagggatatggcgtcgcttgacccggagctgctgcagcttccg
gaggtgtctcatttagctctaaaggcgaaacctaaaatagctgaagagttgtacttccag
tggctttcgtttccagaaacgggaaaattggttaagtcgttgatcgaagatgcaaaatct
ggttcaccattgaatgctgttggcagctctagtacttcgggtgctgctgctactaattca
ctgccttccatgtttcctgctggcagtgcacctcctctctcacctagaagcactactgga
tctccccgctttatgaaacgtagttcgggagctgggccttcaccctttggttctccacta
aaattagtcagtgaacctgtcaaagaagttatacctcagttctacttccaaaatggacgt
ccacctccaaaagcactgaaggaacagtgcttgtctagaattgatcatcttttcttcggc
aacatggacggagtacaaatccaagaattcaaaaccgttacaaaagaaatttgcaagctg
ccatcatttctttccagttcccttttcagaaagatcgatgttgaatgtactggaatagtg
acaagggatgcatttgttgaatattggatcaatagcaacatgatgacaaaggatatagct
acgcagatatttacaattttgaagcaagcagatcgcaagtaccttactcaggaggacttc
aaacctgtcctgcgagaactcctggcaacccatccaggtttggagttcctacaggggact
cctgagtttcaggaaagatatgctgaaactgtcatatacagaattttctactacatgaat
agatctggaaatggtcaaattaccctcagagagctgaaacgtggagatttgattgctgca
atgcagcatgcagatgaagaggaagacatcaataaagttttgaggtacttctcatacgag
cacttctatgtgatatactgcaagttttgggagctcgatacagatcatgatttcttaatt
gataaagagaaccttatcagatatggaaatcattcattgacctacaggattgttgagagg
atcttttcacaggtacccaggaaatttaagagcaaggctgatggtaaaatgggctatgaa
gattttgtgtattttatactatcagaggaggataagtcagctgagcctagcctggagtat
tggttcaagtgtatagatttggatggtaatggaattataaccgccaacgaaatgcagttt
ttctatgaggagcagttgcatcgtatggaatgtatggcacaggagcctgtactctttgag
gacattttgtgccagatgattgatatgattggaccagagaatgagagttactttacactg
cgtgacctgaaaggtggcaagctttcaggaaatatttttaatatccttttcaacctcaac
aaattcatggcatttgaaactcgtgatccttttctaattcggcaggaacgggaaaatcca
actttgacagagtgggatcgttttgcacatagagagtatattaggctgtctatggaggaa
gatggtgaagatgcttccaatggaagcggagacatctgggatgaatcacttgaggctccc
ttttaa
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