KEGG   Musa acuminata (dessert banana): 103995560
Entry
103995560         CDS       T03447                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03082  ATP-dependent chromatin remodeling
mus03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103995560
   03083 Polycomb repressive complex
    103995560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mus03036]
    103995560
Chromosome and associated proteins [BR:mus03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     103995560
  Histone modification proteins
   HAT complexes
    HATB complex
     103995560
   HDAC complexes
    Sin3A-HDAC complex
     103995560
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     103995560
    PRC2.2
     103995560
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     103995560
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103995560
  Chromatin remodeling factors
   NuRD complex
    103995560
   NuRF complex
    103995560
   NuRF complex (fruit fly)
    103995560
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I WD_LRWD1 Beta-prop_WDR75_1st Beta-prop_EML WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_SCAP MIOS_WD40 Beta-prop_WDR19_1st Beta-prop_TEP1_C eIF2A Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 103995560
NCBI-ProteinID: XP_009414440
UniProt: A0A804KE06
LinkDB
Position
BXJ2-8:53994998..54002949
AA seq 404 aa
MEEVERGEEGAAMEAEEYRVWKKNTPFLYDLVISHALEWPSLTVQWLPSSSSSSGGGGAS
HRLLLGTHTSDEAPNFLMVVDVRFPLPPPPPSDAPILKVEISQTIPHQGEVNRARFMPQG
PSIVATKTCGAEVNVFDCSRRPTRPTEGEETEPDVVLRGHATEGYGVSWSPLKEGYLLSG
SYDSKICLWDVGMPPRNKVLDAKHVFEAHAAAVEDVAWHPENENLFGSVGDDHLLMIWDL
RSSASKKPQQMVTAHQDEVNSLSFNPFNEWILATASADTTIKLFDLRKLTTSLHTFSSHT
GAVLQVEWSPRQETVLASSAADKRLMIWDLCRIGDEQTVEDADDGPPELLFVHGGHTSKI
SEFSWNPAMPWVIASVAEDNILQVWQMAESIYRDDCDTQNDNDY
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggaggaagtggagagaggagaggaaggcgcggccatggaagcggaggagtaccgggtg
tggaagaagaacaccccttttctctacgatctcgtcatctcccatgcccttgaatggccc
tctctcaccgtccagtggctcccttcgtcctcctcctcaagcggcggcggcggagccagc
catcgcctcctccttggcacccacacctcagacgaggcccccaactttctcatggtcgtc
gatgtccggttcccgctccctcccccgcctccctctgacgccccgatcctcaaggtcgag
atctcgcagaccattccccaccagggggaggtcaatcgcgcccgcttcatgccgcaggga
ccctcgatcgtggccaccaagacgtgtggggcagaggtaaatgtgtttgactgcagccgg
cggccgacgaggccaaccgagggggaggagaccgagccggacgttgtgctcagaggccat
gccactgaagggtacggagtgtcgtggagtcccctcaaggagggctatcttttgagcgga
tcgtacgattccaagatttgtctgtgggatgtgggaatgccgccgaggaacaaggttctt
gatgcaaagcatgtgtttgaggctcatgccgctgcagttgaggatgttgcctggcacccc
gagaatgaaaatctgtttggatctgttggagatgatcatcttttgatgatatgggatctg
cgttcatctgcatcaaagaagccacaacaaatggtcacagctcaccaggatgaggtcaat
tcactgtcattcaatccattcaatgagtggattttggctacagcatctgcagacacaacc
attaaactatttgatctgcgaaagctgacaacaagtttgcatacattctccagtcacacg
ggagcagtgcttcaagtggaatggagcccaagacaagaaactgttttagcttcctctgct
gccgacaaaaggctgatgatttgggacctttgcaggattggagatgaacagacagttgaa
gatgctgatgatggaccaccagagcttctcttcgtccatggaggtcacacttccaagata
tcagaattttcgtggaaccctgcaatgccatgggtcattgccagtgtggcagaggataat
atccttcaagtctggcagatggctgagagcatttatcgagatgattgtgacacacaaaat
gacaatgattattag

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