Musa acuminata (dessert banana): 103995560
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Entry
103995560 CDS
T03447
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
mus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103995560
03083 Polycomb repressive complex
103995560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103995560
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103995560
Histone modification proteins
HAT complexes
HATB complex
103995560
HDAC complexes
Sin3A-HDAC complex
103995560
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103995560
PRC2.2
103995560
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103995560
Heterochromatin formation proteins
Other heterochromatin formation proteins
103995560
Chromatin remodeling factors
NuRD complex
103995560
NuRF complex
103995560
NuRF complex (fruit fly)
103995560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_SCAP
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
eIF2A
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
103995560
NCBI-ProteinID:
XP_009414440
UniProt:
A0A804KE06
LinkDB
All DBs
Position
BXJ2-8:53994998..54002949
Genome browser
AA seq
404 aa
AA seq
DB search
MEEVERGEEGAAMEAEEYRVWKKNTPFLYDLVISHALEWPSLTVQWLPSSSSSSGGGGAS
HRLLLGTHTSDEAPNFLMVVDVRFPLPPPPPSDAPILKVEISQTIPHQGEVNRARFMPQG
PSIVATKTCGAEVNVFDCSRRPTRPTEGEETEPDVVLRGHATEGYGVSWSPLKEGYLLSG
SYDSKICLWDVGMPPRNKVLDAKHVFEAHAAAVEDVAWHPENENLFGSVGDDHLLMIWDL
RSSASKKPQQMVTAHQDEVNSLSFNPFNEWILATASADTTIKLFDLRKLTTSLHTFSSHT
GAVLQVEWSPRQETVLASSAADKRLMIWDLCRIGDEQTVEDADDGPPELLFVHGGHTSKI
SEFSWNPAMPWVIASVAEDNILQVWQMAESIYRDDCDTQNDNDY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtggagagaggagaggaaggcgcggccatggaagcggaggagtaccgggtg
tggaagaagaacaccccttttctctacgatctcgtcatctcccatgcccttgaatggccc
tctctcaccgtccagtggctcccttcgtcctcctcctcaagcggcggcggcggagccagc
catcgcctcctccttggcacccacacctcagacgaggcccccaactttctcatggtcgtc
gatgtccggttcccgctccctcccccgcctccctctgacgccccgatcctcaaggtcgag
atctcgcagaccattccccaccagggggaggtcaatcgcgcccgcttcatgccgcaggga
ccctcgatcgtggccaccaagacgtgtggggcagaggtaaatgtgtttgactgcagccgg
cggccgacgaggccaaccgagggggaggagaccgagccggacgttgtgctcagaggccat
gccactgaagggtacggagtgtcgtggagtcccctcaaggagggctatcttttgagcgga
tcgtacgattccaagatttgtctgtgggatgtgggaatgccgccgaggaacaaggttctt
gatgcaaagcatgtgtttgaggctcatgccgctgcagttgaggatgttgcctggcacccc
gagaatgaaaatctgtttggatctgttggagatgatcatcttttgatgatatgggatctg
cgttcatctgcatcaaagaagccacaacaaatggtcacagctcaccaggatgaggtcaat
tcactgtcattcaatccattcaatgagtggattttggctacagcatctgcagacacaacc
attaaactatttgatctgcgaaagctgacaacaagtttgcatacattctccagtcacacg
ggagcagtgcttcaagtggaatggagcccaagacaagaaactgttttagcttcctctgct
gccgacaaaaggctgatgatttgggacctttgcaggattggagatgaacagacagttgaa
gatgctgatgatggaccaccagagcttctcttcgtccatggaggtcacacttccaagata
tcagaattttcgtggaaccctgcaatgccatgggtcattgccagtgtggcagaggataat
atccttcaagtctggcagatggctgagagcatttatcgagatgattgtgacacacaaaat
gacaatgattattag
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