Musa acuminata (dessert banana): 103995739
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Entry
103995739 CDS
T03447
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103995739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
103995739
03009 Ribosome biogenesis [BR:
mus03009
]
103995739
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103995739
Spliceosome [BR:
mus03041
]
Complex A
U1 snRNP components
U1 related factors
103995739
Complex B
103995739
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
Helicases
103995739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103995739
NCBI-ProteinID:
XP_009414695
LinkDB
All DBs
Position
BXJ2-8:52552725..52567254
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AA seq
820 aa
AA seq
DB search
MAGGGSASSRPRYAPEDPTLPKPWRALVDGSTGYLYYWNPETNVTQYERPADELPPPPPL
LPPPPPLLPPKAASVVPAERRHHHEDDDRYGRSRSHQHGGGKSSSMHDHGHDTKDSREPR
ATSTRGHASSADGGAFASAEAYRRQNEIIVTGDDVPAPFMTFESTGFPAEILKEVYHAGF
SHPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPGFIHLKRLRNNSKLGPTMLILAP
TRELATQIQDEAVKFGRSSKILCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMK
RVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPHRRQTLMFTATWPKEVRKIAADLLV
HPVQVNIGSTDELVANSAITQYVEVITPLEKQRRLEQILRSQDPGSKVIIFCSTKRMCDQ
LARTLTRQFSASAIHGDKSQAERDRVLSQFRTGRSPILVATDVAARGLDIKDIRVVINYD
FPTGVEDYVHRIGRTGRAGATGLSYTFFCDQDSKYAADLVKVLEGANQRVPKELRDMVSR
GGFGGRSRRWGSRSDARDGGRTQSGRINSSYNGKGGQGLLPLPVRSDIQHGSRGIIDHEP
HDRSKGRGRSPTRSRSQSRSRSHGRRYSPISKRVPARHASPHSRNHGRSRSRSHSHSPSR
GFDRHGVGTGQASRVGSSPARRVQSPVVHGSNDPDRSPMQYYEDQQRPQSYDGEHGRKAE
LDHSPSPHDEIRRSPYSIIDNGRPQGSPGQGPWPAGSSPRNGDTEQPIPRSPPLQNNKCG
GEEEEGMIPADEEDGVIPLEEDSKTSPKSKSPARRPGLDN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggcggcagcgcatcgagcaggccgcggtacgcccccgaggacccgaccctg
cctaagccgtggcgggcgctggtggacggtagcaccgggtacctctactactggaacccc
gagaccaacgtcacccagtacgagcgccccgccgacgagctcccgccgccccctcccctc
ttgcccccgcccccccctctcctccctcccaaggccgcctccgtcgtcccggctgagcgc
cgccatcatcacgaggatgatgatcgctatggccgttctaggagccaccagcacggaggt
ggtaaaagcagtagcatgcatgaccatgggcatgacaccaaggactcacgggagccgagg
gcaacttctaccagaggccacgcatcatctgcggatggaggggcctttgcctctgccgaa
gcatatcgccgtcagaacgaaataatagtcacgggagatgatgtacctgcaccattcatg
acatttgaatctacgggtttccctgcagagattctcaaagaggtataccatgcaggtttt
tctcacccaactccaattcaggctcagtcatggccaattgcattacagaatcgtgatatt
gtagccattgcaaagacaggatcaggcaaaacactcgggtatcttattccagggttcatt
catcttaagcgccttcgcaacaactctaagctgggtccaacaatgttaatacttgcacca
acaagggagctggcaacacagatacaagatgaggctgtgaagtttggaagatcatcaaaa
attttatgcacgtgtttatatggaggtgcacctaaaggccctcagttgagggaccttgat
cgaggagtagatgttgttgttgcaactccaggaagattaaatgacattttggagatgaaa
agagtcagcctccgtcaggtttcttatctggttcttgatgaggctgatagaatgctggac
atgggttttgagccacaaattcggaaaatcgtgaaagaagtaccacatcgtcgccaaaca
cttatgttcacggctacatggcccaaagaagttcgaaaaattgctgcagacctactagtt
catcctgttcaggttaatattggtagcacagatgagcttgttgcaaatagtgccatcacc
cagtatgtggaagtaattaccccgctagagaaacaacgacgactagagcagatattacgg
tcccaagatccaggttctaaggtcataatattttgttccacgaagagaatgtgcgaccag
ctggctcggaccctcactcgtcagtttagtgcttctgctattcatggtgataagtctcag
gctgagagggatagggttttaagtcaatttcgcactggaagatctcccattctagtggca
actgatgttgctgctcgaggtctagacatcaaggatatcagggttgtgatcaactatgac
ttccccacgggagttgaagactatgttcacagaattggtagaactggtagggcaggtgcc
actggattatcttacacatttttctgcgaccaggattccaagtatgctgcagatcttgtt
aaggttcttgaaggtgccaaccaacgtgttccaaaggagttaagggacatggtgtcacgt
ggtggatttggcggcaggtctcgtcgctggggttctcgttctgatgctcgtgatggtggt
cgcacacaaagtggaagaatcaactccagttacaatggaaaaggtggacagggcctgctt
cctctgcctgttagatcagacattcaacatggcagtcgtggaatcattgaccatgagcct
catgacagatctaaaggccgaggccgaagccccacccgtagccgcagccagagccgtagc
cgtagccatggtcggaggtatagccctatttcgaagagggtacccgctcgacatgcaagt
cctcatagcaggaaccatggtcgcagtcgaagtaggagccacagtcacagtcctagccgt
ggttttgatcgtcatggggtgggaactgggcaggcatcacgtgtgggttcatcaccggca
aggagggtgcaatcgccggtagttcatggctcaaatgatccagatcgttcacctatgcag
tattatgaagatcagcaaagaccgcagtcgtatgatggcgaacacgggagaaaggctgaa
ctcgatcactcacccagcccacatgatgagataagacggtccccttacagtatcatagac
aacggaagaccacaaggatcacccggccaagggccatggcctgcagggtcgtcacctaga
aatggtgatacggagcagccgattccaaggtctccgccattgcagaataacaaatgcggt
ggagaggaggaagaaggcatgattcccgcagacgaggaggatggtgtaatccccctcgag
gaagatagtaagacatcgccaaagtcaaagtctcctgcccggaggcctgggctggataat
tga
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