Musa acuminata (dessert banana): 103995878
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Entry
103995878 CDS
T03447
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103995878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103995878
03036 Chromosome and associated proteins [BR:
mus03036
]
103995878
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103995878
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103995878
PBAF complex
103995878
GBAF(ncBAF) complex
103995878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
103995878
NCBI-ProteinID:
XP_009414879
UniProt:
A0A804KCL6
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All DBs
Position
BXJ2-8:51419306..51432345
Genome browser
AA seq
781 aa
AA seq
DB search
MSPASPSLPSSDSRLKWRKRKRDANSRRQKPPDDDEDDEDNEDAGRAAEGAQEDGRDSPA
NPATADPVLDLRGSEVLSDGGYRISDFPAAVRHIVNRPHPSVLALVAAERSNFAARPWVP
PLLENISYGQLQALSAVLPDNPSLLQPSDLEKPSAYVCTPPPLMEGKGMVKRFGKEQLLL
VPMHSDWFSGSTVHRLERQVVPHFFSGKSGDHSPEKYIGLRNKIISKYLENPGKRLSFAD
CQSLVPNNELYDLSRIVRFLDHWGIINYLAASSVHRGLRMAGSLLKEDVSGELQLQTAPL
RSIDSLILFDRPKCSLRLDDVALLSHSASVDFDAGIGDLDSRIRERFAEHTCNFCSCPLT
NLHYQSQKEDDIMLCLDCFHDAKFVMGHSSLDFIRMDSRNDHPDLDGDNWTDQETLLLLE
ALEKYNENWNEVAEYVGSKTKAQCILHFLRLPMENGLLENIELPHMPTSVDSSNVPDPVI
QNSNSNGNIVGNRDFCNGSELPFSNSANPVLSLVAFLTSAIGPRVAAACTSAALSILTRE
DSRIRSESWHSEVGICGPHGNLGPHKDGTLEGQVPQSTSLAPELVKYAAMCGLSAAAVKA
KLFADQEEREIQRLAATIINHQLKRLELKLKQFAELETLLLKECEQAERMRQRLSSERLR
MMSTRFGSAANNLSSSSSSSSSSSVAAAAPTAVSANTVPPTMSPSVGQANVPATYGSNLP
GHRQMQFLQRQQMFGFGPRLPLSAIHPAPAPSQNVVFSSGVPNTSTPNHHPLLRPSSGNN
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgcttccccttctctcccctcttcagattcgcggctcaaatggcggaagagg
aagcgcgacgccaattccaggcgccagaagccgccggacgacgacgaggatgacgaggac
aacgaggatgctggccgcgccgcggagggggcgcaggaggacggccgcgactcccccgcc
aaccccgccaccgccgatcccgtcctcgacctccgcgggtctgaggtcctttccgacggc
ggctaccggatctccgacttcccagccgccgtacgccacatcgtcaatcgcccccaccct
tccgtcctcgccctcgttgccgccgagcgctccaactttgcagcccgcccgtgggttccc
ccccttttggagaacatctcttacggccagctgcaggccctctcagcggtgctccccgat
aacccttcgctgctgcagccgtcagaccttgaaaagccctcggcttatgtttgtacaccg
ccgcctctcatggaagggaagggcatggtgaagcggttcggcaaagaacagcttctcctt
gttccaatgcactccgattggttttctggaagcactgtgcatcggctggagaggcaagtt
gtgccgcacttcttctcagggaaatctggcgatcacagcccagaaaagtacatagggctt
cgaaacaagataatttccaagtacctggagaatcccgggaagaggctatcttttgcggat
tgccaatcgttggttccaaacaatgagctttatgatcttagtcgaatagttaggtttctg
gatcactgggggattattaattatcttgcagcttcttctgtgcatcgtggtcttaggatg
gctggctcccttcttaaggaggatgtcagtggggagcttcagcttcagactgcaccactg
aggtccatagacagtttgatcttgtttgatagaccaaaatgtagcctccgtctagatgat
gttgctttgctttctcattctgcatcagtagattttgatgctggcattggtgatttggat
agtagaattagggaacggtttgctgaacatacatgcaatttctgttcttgcccactcacc
aatttgcactatcaatcacaaaaagaggatgatattatgctttgcttggactgcttccat
gatgcaaaatttgttatgggccattcgagcctagattttataagaatggattcgagaaat
gatcatccagatcttgatggggataactggacagatcaggaaacattgctgttacttgaa
gccttagaaaaatataatgaaaactggaacgaagttgcagaatatgtgggcagcaagaca
aaagcacaatgtattttgcattttcttcgccttccgatggaaaatggtctactagaaaac
attgaacttccacatatgcccacttcagttgattcatcaaatgtacctgatcccgtgatt
caaaattcaaattctaatggtaatatcgtaggcaatcgagatttctgtaatggtagcgag
ctcccattttcaaattctgccaatccagttctgtccctggttgccttcttgacctccgca
attggaccaagagttgctgcagcttgtacaagtgcagcattgtctatcctgactagagag
gactccaggatcagatctgagagctggcattccgaagttggcatctgtgggccacatgga
aacttgggtcctcacaaagatggaactctagaaggtcaagtgccacagtctacttcgctt
gctcctgaacttgtgaaatatgctgccatgtgtggcctatctgcagctgcagtgaaagca
aaattatttgcagatcaagaggagcgtgaaattcagagactggctgcaactatcataaat
caccagctaaagaggttggagctgaagctgaaacagtttgcagaattggaaaccttactg
ctcaaggaatgtgaacaggctgagaggatgagacaaaggctttcatctgaacgcctccga
atgatgtccacccgatttggatcagcagcaaacaatttatcatcatcatcgtcatcatca
tcatcatcatcagtagcagcggctgcgccaaccgctgtcagtgcaaataccgtgccgcct
accatgtcaccctcggttgggcaggcgaatgtgccagctacttacggcagcaatcttccc
ggccatcggcagatgcagttcctgcaacggcagcaaatgtttggttttgggccgcggtta
cctctctcggcaatccaccctgctcctgccccctctcaaaatgttgtgttcagttctggt
gtacctaacacttcgactcctaaccatcatccattgttaagaccctcatcggggaataat
caatag
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