KEGG   Musa acuminata (dessert banana): 103997067
Entry
103997067         CDS       T03447                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
mus  Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:mus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mus03036]
    103997067
   03400 DNA repair and recombination proteins [BR:mus03400]
    103997067
Chromosome and associated proteins [BR:mus03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103997067
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103997067
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2 PHZA_PHZB HEAT_EZ DUF3829
Other DBs
NCBI-GeneID: 103997067
NCBI-ProteinID: XP_064980676
LinkDB
Position
BXJ2-9:3875321..3893236
AA seq 1126 aa
MEKPNSWIAHVEAFVDSARASNQQAASVDAIAVLVHKDLLTLEGLVREMEQYLTASDHVI
RARGILLLSEVLSRLLEKPLDSRTVSSLVEFFTSKLEDWQALRGALIGCLALLKRTKKFG
MVESNDAKSLAESFLRNVQVQSLAVRDRKLCFEVIQRLLDVYPQAVVELGDDLVYGICEA
IDEEKDPRCLMLTFSLVGTLGRLFPDPSGPMGNFSSDVFDILSRYFPIYFTHPKGDGLDI
TRDDLSKALMDAFSSSPLFEPFVIPLLLEKLSSSLPSAKLDSLKYLNSCLRHYEADKVVK
HSQVIWSNLKDVIFNLSPHRSSLSTYGSDGDMDSEVNKIADEALNCLQTAISHLNFPDQD
SFLCLIIDDEDIGTRFWSVTSIKKYSGTSTEIHCQLSALGSILSIASKVSIYCCTKVFQK
FFSCLMDILGVSGKHPSKLCVTDHNTCSDGLNFGALYLSMELLTSCRELTLSSKEFAPEV
ISEPRSWFYVLKNISRELCDALGSILETPESAEHVYCAVKSLQVLATFPEIYSPVSEATF
EDILVMLMSIIARRSKETYLWELSLKALVQIGLWIENAHDSAKATSYNKLVIQRIVSMLQ
SNDSTISLSLKLVAISEISSIGLYLLRIVQAFEEAIVSNLRACFEGNLKSSDVLVPLLQC
YSNQVLPRCHTCGNFNDIAVQVAVSIWNQIENVAVFSSAILMKDVLDQVMMTMKHLVAGC
TEESQFLILQKAYGSLPKTFFIAEPLPCALSQLEGLQCIQDTTLMSCQDEWIFSLFGSVV
IALRPQTPFVNVKILLNLFVVLLHKGNMPAAQALASMVNKWPADVNKSEISYSLDQAIEE
ILKSCLWTSESSSNFIDRDSCFHKYVVLGLAWIGKGLLMRGHEKLKEIAMLLLKCLVAGK
YVDITPFQQHENGKDAGQDASSPLATFAADAFHVLLSDSEDCLNKKFHATIRPLYKQRFF
SSMLPILLSSIKESDPSSKKVVLYRAFGHVISDTPLAAVVGEAKKIVPTLADALAMLSLD
ILNKDLIYSLLLVVSGILMDDNGKAIVLENVHTIISLLIKLISYPHLMIVRETAIQCLVA
ISALPYARIYPYRPQVLRAVSTALDDRKRVVRQEAVRCRQAWASIA
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggagaaaccaaattcgtggatcgcccatgtcgaagcgtttgtggactccgctcgcgcc
tcgaaccagcaggctgctagtgtggatgccatcgcagtcctagtgcataaagacctctta
acccttgagggattggtgagagagatggaacagtatctaaccgcctcagaccatgtgatt
cgtgctagaggtatacttctcctatcagaagtgctttctcgtcttctagagaagccatta
gatagtcgcactgttagtagcttggtggagttcttcacatcaaagctggaagattggcaa
gccctccgtggagcccttattggttgcttagctcttttgaaaaggacaaaaaaatttggt
atggttgaaagtaatgatgccaagtcacttgcagaatcttttttaagaaatgtacaagta
caatcactagcagttcgtgatcgtaagttatgctttgaagttattcagcgcctgttggat
gtgtaccctcaggctgttgtagagttgggtgatgaccttgtgtatggaatatgtgaagca
atcgatgaagaaaaagatcctcgatgcttgatgcttactttctctctggttgggactttg
ggacgactgtttcctgatccgtctggtccaatggggaacttttcttctgatgtttttgat
attctgagccgatattttcctatatacttcacacatccaaagggtgatggcttagatata
acaagggatgacctttctaaggcattaatggatgctttctcttcatctccacttttcgaa
ccatttgttatcccattgctccttgaaaaactctcctcatcccttccatcagcaaagctt
gattctttgaagtatcttaacagttgcttgcgccactatgaagcagacaaggtggtcaag
cattctcaagttatctggtctaatttgaaagatgtgatctttaatctttcaccacatagg
tcttcattatcaacttatggttccgatggggatatggattctgaggttaataaaattgca
gatgaagctctaaattgtttgcaaacagctatttcacacttgaactttcctgatcaagat
tctttcttgtgtttgattattgatgatgaagatatagggacaagattttggtctgtaaca
agtataaaaaaatattcaggcacttcaacagaaatccattgtcaattaagtgctcttgga
agtatcttatctattgcatcaaaggtatccatatattgctgcaccaaggtgtttcagaag
ttcttttcctgcctaatggatattttaggagtttcaggaaagcatccatctaaactttgt
gttactgaccacaacacatgttctgatggattgaattttggagcactttatctttccatg
gaactccttacttcatgtagagaattgactttgtcttccaaggaatttgcgccagaagtt
atttcggaaccaagaagctggttttatgtgctaaaaaatatctccagagagttatgcgat
gcccttgggtcaattttggagacaccagagagtgcagaacatgtttattgtgcagtgaaa
agtttgcaagtgcttgcaacatttccagaaatctattcacctgtttctgaggcaactttt
gaagatatattagtgatgcttatgtcaataatcgctagaaggagcaaggaaacttacttg
tgggaattgtctttgaaagccttagtccaaattggtttgtggattgaaaatgctcatgat
tctgcaaaagcaacaagttataacaaacttgtcattcagagaattgtttccatgcttcaa
tctaatgattctactatctctctttcactgaaactggttgcaatttctgaaattagcagc
attggcctctacctgctaagaatagttcaagcatttgaagaggctatagtttccaactta
agagcttgctttgaaggaaatctaaaatcgtctgatgttttagttcctctgctccagtgc
tactccaatcaggtgcttccaagatgccacacttgcggaaatttcaacgatatagctgtt
caagttgctgtcagtatatggaatcaaatagaaaatgtggctgttttcagtagtgccata
ttaatgaaggatgttcttgatcaggttatgatgacaatgaagcatttagtcgcgggatgt
acagaggaaagccagttcttgattttacaaaaagcatacggcagtcttccaaagaccttt
tttatagcggagccattgccctgtgctttgtcacaactcgaaggcttacaatgcattcaa
gataccactctcatgtcatgtcaagatgaatggattttttctctttttggatcagtagtt
atagcacttcgtccgcagactccttttgtaaatgtgaaaatacttttgaacttgttcgtg
gtccttctacacaaaggaaatatgccagcagctcaagccttggcatccatggttaacaag
tggcctgcagatgttaacaaatcagaaatatcttattctttggatcaagcaattgaggag
attctgaagagttgtctatggacttcagaaagcagtagcaattttatagatagagatagt
tgttttcataaatatgttgtccttggactggcatggattggaaaaggtttgcttatgagg
ggacatgagaaactaaaggaaatagcgatgcttcttttgaaatgtctagttgctggtaaa
tatgtcgatataacaccttttcaacagcatgagaatggtaaggatgctgggcaggatgca
agttcccctttggcgacatttgcagcggatgcattccatgtacttctaagtgattcagaa
gattgtctgaataagaagttccatgcgacgataaggccactttataagcaacgtttcttc
tcaagcatgttgccaatcctgctctcttcaatcaaagaatccgatccctcgagtaaaaaa
gtggtattatatcgagcttttggacatgttatttctgacactccactggctgctgtggtt
ggtgaagccaagaagattgtgcccacactagctgatgcgttggctatgttgagtttggat
attctgaataaagatctgatatacagtctgctgctagttgtctcggggatactgatggat
gataacggtaaagcaattgtcctcgagaatgttcacaccatcattagcctccttatcaaa
ctgatttcctaccctcatttgatgattgttcgtgaaacagcaattcagtgcctagtagcc
atttcagctcttccttatgcaaggatttacccatatcgaccacaggttcttcgagctgtt
tcaactgctctggatgatcgaaaaagagttgttcgtcaggaggctgtcagatgccgtcaa
gcatgggcatcgattgcatga

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