Musa acuminata (dessert banana): 103998065
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Entry
103998065 CDS
T03447
Name
(RefSeq) SWI/SNF complex subunit SWI3A homolog isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103998065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103998065
03036 Chromosome and associated proteins [BR:
mus03036
]
103998065
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103998065
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103998065
PBAF complex
103998065
GBAF(ncBAF) complex
103998065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103998065
NCBI-ProteinID:
XP_009417716
UniProt:
A0A804KJX2
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Position
BXJ2-9:complement(11256107..11261153)
Genome browser
AA seq
547 aa
AA seq
DB search
MPPSSEGSDLADRELYSIPSSASWFRWDDIDDTERRCLPEFFDGSSTSRNPRVYKEYRDF
IISKYREDPTKCIAFTEIRKSMIGDVGYLHKVFLFLEKWGLINFGVKVPKTSVEDAGPKV
VVEEGPPADVQVVPACIPQRKLVGMASSVGGENGFKLPPLTSYSDVFGDWLPKRGLVCGI
CGDQSAAGGYESLQDGVMVCSKCSKNNSQADGRTTEDSNHQVDDDAKAEGSANNVISAWT
DAETLLLLEAVLKHGDDWALIAQHVRTKSKLDCIARLIQLPFGEHILGSINGTCANSNLI
TQATDVKKQSLINEPPQELIKTDLHIQTDEKDLVEEPMAERPLKRRCLPSFVHVADSLIK
QVAGFSTVAGAQIATAAADAAIVALCSENISARKHISINKNGENDLLYTNNDHNSHFSGL
KIEDQDMELHKQTVVSEKSLSATAFQVRAAIATALGAVAARAKLLADQEEREIELLMASI
IEVQLRKIQCKIKHFEELESMMEHEYTLLQKVKESTLEEWVTVLQQAFQAGIPRWSDDEL
PKPFTTM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgagctccgaaggcagcgacctcgccgaccgcgagctctactccatcccctcc
tctgcgagttggttccggtgggatgacatcgacgacacggagcggcggtgtctgccggag
ttcttcgacggctcctctacctcacggaaccctagagtctacaaggagtaccgtgatttc
atcatcagcaagtaccgggaggaccccaccaagtgcattgccttcaccgagatccgaaag
tctatgatcggcgatgtcgggtatctccacaaggtgttcttgttcctggagaagtgggga
ttgatcaattttggggtgaaggtgccgaagacatcagtggaggatgctgggccgaaggtt
gtggtggaggaagggccgccggcggatgtgcaggtggtgccagcatgcataccgcagagg
aagctggtgggaatggcgtcgtctgtgggtggagagaatggattcaagttgcccccattg
acgtcgtactcagatgtatttggagattggttgccaaagaggggactggtgtgtggaata
tgtggggatcagtccgctgctggaggatatgagtcgttacaggatggagtgatggtatgt
tcaaaatgttctaaaaataatagtcaggctgatggtagaacaacagaggactcaaatcat
caggtggatgatgatgctaaggctgaaggtagtgctaacaatgtaattagtgcatggaca
gatgcagagacactactccttctagaagctgtcctaaagcatggagatgactgggctctt
attgctcagcatgtacgaaccaagagtaagcttgattgtattgcaaggcttatacaactg
ccttttggtgagcatattctgggctcaattaatggtacatgtgctaatagtaacttgata
actcaagcgactgatgtcaaaaagcaatccttaataaatgagccaccacaagagcttatc
aaaacagatttgcacatccaaaccgatgagaaagatcttgtggaagaacctatggcagaa
cgtcctctaaagagaagatgcttgccgtcctttgtacatgttgcagattcactaataaag
caggtagctggcttttctactgttgctggcgcacagattgctactgcagcagcagatgca
gctattgtggcactgtgcagcgaaaatatatctgcaaggaagcacatttcgatcaataag
aatggggaaaatgatttactttatactaacaatgatcataacagtcatttcagtggattg
aagattgaagatcaggatatggagttgcataaacagacagttgtctcagagaagagctta
agtgctacagcatttcaagtaagggctgccattgcaactgcactgggggcagtagctgct
cgtgccaagttactagctgatcaagaagagagggaaatagaacttctgatggcatccatt
attgaagtgcagctgagaaagatacaatgcaagatcaaacattttgaagagttggagtcc
atgatggagcatgagtacacactattgcaaaaggtgaaggaatctactctcgaggagtgg
gtgacggtgctccagcaggcgtttcaggcagggatcccaagatggagcgatgatgaattg
cccaaacctttcaccaccatgtaa
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