Musa acuminata (dessert banana): 103998067
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Entry
103998067 CDS
T03447
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103998067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103998067
Enzymes [BR:
mus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
103998067
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
103998067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
103998067
NCBI-ProteinID:
XP_009417719
UniProt:
A0A804KJX7
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Position
BXJ2-9:complement(11279414..11290884)
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AA seq
764 aa
AA seq
DB search
MNSSDKMVRKPPPAPRQYGLTKPISTAGPTAADLKRTIELEKFLLDAGLYESKEEAIKRE
EVLGEINEIVKSWVKQLTRQRGYSDQMVEEANAVIFTFGSYRLGVHGPGSDIDTLCVGPS
YVNREEDFFIVLHDILAEMEEVSELQPVPDAHVPVMRFKFHGISIDLLYASISQLVVPED
LDISHGSVLYDVDEATVRSLNGCRVADQILRLVPKIENFRTTLRCLKFWAKKRGVYSNVT
GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCATEEDELGLPVWD
PRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQIGNMTCEDIELNKAGWSAL
FESYLFFETYRNYLQIDIVAADSEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPNE
YVDHSRQWSHCAFFMGLQRKQGVKIQEGQQFDIRGTVDEFRHEVNMYMFWKPRMEIYVSH
VRRKQLPSYVFPVGHKRPRPSRPIGQQLIDKTSGEDSCDECQGGPSVLPLKRRMNADYLD
DRANKLEKQASINSSWEKFPNSDQHNHVDVDENWSKRKKDEPHEVVFKQVSYGSVCLSWQ
LQAFASNIDNISERIPNDIVCFKAHSLENLAVVGSSDVDDGTEGPFGDDQDGNGAKLVNG
ISHFGSGKASAGKLFCNSETFEAVVMQQLAGSDSTSLDDGQDLLHYGRQGANVEMDNLNG
SARDGVGDTLKPNFAFGVALQKAHGVTANAAQKPALSLSLISKA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttctgataaaatggttcgcaaaccgccacctgctccaagacaatatggtctg
acaaagccaatctcgactgctgggcctaccgcagcagatctcaagaggacaattgaacta
gagaagttcttgctcgatgctggactttatgagagcaaggaagaagctatcaagagagag
gaggttttaggagaaataaatgagattgttaaaagctgggtgaagcagttaactcgtcaa
aggggttactctgatcaaatggttgaagaggccaatgctgtcatttttacatttggatct
tatcgtttgggggttcacggaccagggtctgacattgatacgctgtgtgttgggccttcc
tatgttaatcgagaggaagacttcttcattgttttgcatgacattttggctgaaatggag
gaagtttctgaactgcaaccagtgcctgatgctcatgttcctgttatgagatttaaattt
cacgggatatccatcgatcttctttatgccagtatatcacagttagttgttccagaggat
ttggacatctcccatggatctgtgctttacgatgttgacgaggcaacagttagaagtctt
aatggctgtagggtagcagaccaaattcttcggttggtgccaaaaatcgagaattttcga
acaactctcagatgcttgaagttctgggctaagaagcggggagtttattcaaatgtgact
ggatttcttgggggtgtaaattgggctctgttggttgctcgtgtctgtcagctttatcct
aatgctgtcccaagtatgctagtatcacgattcttcagagtttatactcagtggcgctgg
ccaaatccagtaatgttgtgtgctactgaggaagatgaacttggtctccctgtgtgggat
ccgcgtaagaacccacgagatcgaactcaccatatgcctattattactccggcatatcca
tgcatgaactctagttataacgtatcaacaagcacattaagagttatgatggaacaattt
caaattggcaacatgacctgtgaggatattgagttgaataaggcaggttggagtgctttg
tttgagtcttaccttttctttgagacatacagaaactatctccagattgatattgtagct
gctgattctgaggatctaaggttatggaaggggtgggttgaatcacgtctgaggcagttg
actctgaagattgagcgggacacctatggcatgctgcagtgccatccataccccaatgag
tatgtagatcactccagacagtggtcacattgtgccttctttatgggcttgcaaaggaaa
caaggggtgaagatccaagaaggccaacagtttgatatacgtggaaccgttgatgagttt
aggcatgaagtgaacatgtatatgttctggaaacctaggatggaaatatatgtttctcat
gttcgtagaaagcagctaccttcttatgtttttccagtaggacataagagacctcgtcca
tccagacccataggccagcaactgattgataaaacttctggtgaagattcatgtgatgaa
tgtcaaggaggaccatcggtgcttccacttaagagaagaatgaatgctgattacttggat
gatagagcaaacaaacttgagaagcaggcatcgattaattcaagctgggagaaatttcca
aactctgaccaacacaatcatgtagatgtagatgagaattggagcaagaggaaaaaggat
gaaccacatgaagttgtctttaagcaagttagctatggttctgtttgcctgagctggcag
ctgcaagcatttgcttctaacatcgataacatatcagagcggatacctaatgacatagtt
tgtttcaaagctcatagtttggagaacttggctgtagttggcagcagtgatgtggatgat
ggcacggaaggaccgtttggagatgaccaagatggcaatggagcgaagctggtaaatgga
atttcacattttggaagtggcaaggcttcagcgggaaagctgttctgcaattcagagaca
tttgaggcggtggttatgcaacagcttgctggcagtgatagcaccagtttggatgacgga
caagatctactgcactatggtaggcagggagccaacgtagagatggataacttgaatgga
tcagcacgagatggtgtgggagataccttaaagccaaactttgcatttggagtggccctt
caaaaagctcatggagtgactgctaatgctgcacagaaacccgcactaagtctcagtcta
atttcgaaggcatga
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