Musa acuminata (dessert banana): 103998201
Help
Entry
103998201 CDS
T03447
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103998201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103998201
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103998201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_2
TPR_Slam
TPR_CcmH_CycH
TPR_16
TPR_9
Motif
Other DBs
NCBI-GeneID:
103998201
NCBI-ProteinID:
XP_009417883
UniProt:
A0A804KKD4
LinkDB
All DBs
Position
BXJ2-9:complement(12713914..12748296)
Genome browser
AA seq
755 aa
AA seq
DB search
MTEEPKKGDDNAATDIYNVEAAEILVNEAQALPITEAAPIYEQLLCTFPTAAKYWKQYVE
AYMAINNDEVTKQIFSRCLLNCLQISLWRCYISFIKKVNEKKGLEGVEETKKAFDFMLNY
VGYDIASGPVWLEYIAFLKSLPAKTTQEESHHMTSVRKAYQRAIVTPTHNVEQLWKDYEN
FENSVSRTLAKGLLSEYQPKFNSAKAVYRERKKYVDEIDWNMLAVPPTGSYKEEQQCMAW
KRFLIFEKGNPQRIDTASANRRITFTYEQSLMYLYHYPDLWYDYATWHANSGSVDSAIKI
FQRALKAVPDSELLKYAYAEIEESRGAMQPAKKIYESLLASSSNSMSLAHIQFIRFLRRT
EGVEAARKYFLDARKSPSCTYHVFVAYATMVFCVDKDPKAAHNIFEAGLKKFMNEPGYIL
EYADFLCRLNDDRNVRALFERALSSLPPEKSVEIWIRFCQFEQTYGDLTSMLKVEQRKKE
ALTRSVEEGSTVLENTLYDVISRYSFMDLWPCSPKDLDHLARQEWLVKNINRRVDKSNLL
HGANITEKGSVGLTTNSKVLPPSAKVVYPDTARMVIYDPRQTLGSEAASTSASGSSLVGS
GLKSFDDILKVISPTLMAFITNMPAVEGPSPDIDVVLSILLQSSIPTGQSGKPATSLQQM
PGGPGPTTSDHSGSIKTRMNNGPPHRLPRDGHSGKRKDLDRQEDDESTTVQSRPLPRDVF
RLRQMHRSRGRSTSQTGSAASGGSAFSGDQSVSTD
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagcccaagaaaggcgatgataacgccgctaccgacatatacaatgtcgaa
gctgctgaaattcttgtgaatgaggcccaggctcttcctatcaccgaggcggctccaatc
tatgagcagctcctttgtacatttcccacggctgcaaaatactggaagcaatatgtggag
gcatacatggctatcaacaatgatgaagttacgaaacaaattttcagtcggtgtttattg
aattgtcttcaaatatctctttggcggtgttacattagctttataaagaaagtaaatgag
aagaagggacttgagggtgtagaggaaaccaagaaagcttttgatttcatgctgaactat
gttggatacgatattgcttctggacctgtatggttggagtacattgctttcttgaagtca
ttgccagctaagacaactcaagaagaatcacatcacatgacttctgtaaggaaagcctac
caaagagcaattgtaactccaactcataatgtagaacagctctggaaagactatgaaaac
tttgagaactctgttagtcgcacgttggcaaaagggcttttatctgaatatcaaccaaag
tttaatagtgccaaggctgtatacagagagcggaaaaagtatgttgatgaaattgactgg
aatatgcttgctgtgcctccaaccggctcttacaaggaagagcaacaatgcatggcttgg
aaaagatttctgatttttgagaaagggaacccacaaaggattgacactgcatctgccaat
agacggattaccttcacgtatgagcagagtctcatgtatctctatcattatcctgatctg
tggtatgattatgctacatggcatgcaaatagtggttctgtggattctgcaattaaaatt
tttcagcgggctttgaaggctgttcctgattctgagttactgaaatatgcatatgcggaa
atagaagaatctcggggtgcaatgcagcctgccaagaaaatatatgagagtcttcttgct
agcagttctaattcaatgtctctagctcacattcagtttattcgattcttaaggagaacc
gaaggtgttgaagcagctcggaagtacttcttggatgctagaaaatcaccaagctgtaca
tatcatgtctttgttgcttatgctacgatggtcttttgtgtcgacaaggacccaaaggct
gcacacaacatctttgaagctggattaaagaaatttatgaatgaacctggttacattctt
gaatatgcggattttttatgtcgtttaaatgatgatagaaatgtacgtgctctatttgag
cgggctttgagttcacttcctccagagaagtctgtggagatatggatacgattttgtcaa
tttgagcaaacatatggagatctgaccagcatgttgaaggttgaacaaagaaagaaggag
gctttaactagatcagttgaggaaggttccacagtattggagaatactttatatgatgtc
atctcacgttatagcttcatggatctttggccatgttcgccaaaagatctggatcatttg
gcaagacaggagtggcttgtaaaaaacatcaacagaagggttgacaagtcaaatctacta
catggagctaatatcaccgagaaaggttctgttggattaacaacaaattccaaggttttg
ccgccttctgcaaaggttgtttatccggatactgccagaatggttatatatgatccaagg
caaactttaggatctgaagctgcttccacatctgcatctggttcaagtctcgttggtagt
ggtctaaaatcatttgatgacatcctgaaagtaatttcaccgaccttaatggctttcatc
acaaacatgcctgctgttgaaggaccatctccagatatagatgtggttttatctattttg
ctacagagctctataccaacaggacagtctggaaaaccagccacttctcttcagcaaatg
cctggtggtccaggacctaccacaagtgaccattcgggctctatcaagacacgaatgaac
aatggaccacctcacaggcttcctagagatggacattcaggcaaaagaaaagatcttgac
aggcaagaagatgatgaatcgacgaccgtgcagagtcggccacttccgagagatgtgttt
agactcaggcaaatgcacagaagcagaggtcggagcacttcgcagacgggttcagctgca
tccggtggaagtgcattctcgggcgaccaatcggttagcactgactaa
DBGET
integrated database retrieval system
