Musa acuminata (dessert banana): 103998206
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Entry
103998206 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC103998206 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103998206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103998206
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103998206
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
103998206
NCBI-ProteinID:
XP_009417894
UniProt:
A0A804HVW6
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Position
BXJ2-1:12505358..12516946
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AA seq
320 aa
AA seq
DB search
MSNLPQPHCLAPAFGGGPAPPPLSSAAGGGQPVRDRKIASAEQLVLDLCEPDLRENALGE
LSKKREIFQDLAPLLWNAYGTIAALLQEIVSIYPFLSPPTLSPGASNRVCNALALLQCVA
SHPDTRILFLNAHIPLYLYPFLNTTSKTKPFEYLRLTSLGVIGALVKVDDTEVISFLLQT
EIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFYAVGQVLGSMVTSLA
EQPSARLLKHIIRCYLRLSEHPRACGSLNNCLPNMLKDGSFNNYIDDPTTRHWLQQLLHN
VGGINRVANLQGGLDHIIGS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacctcccgcagccgcactgcctcgcccctgccttcggcggaggccccgcccct
ccgcccctgtcgtccgccgccgggggcgggcagcccgtgagggaccgcaagatcgcgtcc
gcggagcagctcgtgctggatctctgcgaaccggatctccgggagaacgcgctgggggag
ctttccaagaagagagagatatttcaagatttggctcctttgttatggaacgcatatggg
acaattgcagcactcctccaagagatagtttctatatacccttttctttcacctccaact
ttatcaccaggtgcatcaaatagagtctgcaatgctcttgcccttcttcagtgtgtagca
tcacatcctgatacacgaattcttttcctaaatgcacacatccctttgtatttgtatccc
tttttgaataccactagtaagacaaagccatttgagtatttaagattgaccagcctgggg
gttattggcgcccttgtaaaggttgatgacacggaggtaattagttttcttcttcaaaca
gaaataattcctttgtgcctgcgcacgatggagatgggtagtgaactttcaaagacggtt
gcgacctttattgttcaaaagatattgttggatgatgttgggcttcggtacatttgtgct
accgcagaacgtttttatgctgtaggtcaagtgcttggatccatggtcacatcacttgct
gaacagccatctgcgagactgctgaagcatataattcgttgttacttaaggctttcggag
cacccaagggcatgtggaagtttgaacaactgtcttcccaatatgctaaaagacggatct
tttaacaattatattgatgatcctacaactcggcactggctgcagcagctactacacaat
gttggtggcataaatcgggtagccaatcttcagggtggactcgatcatattatcggaagt
tag
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