Musa acuminata (dessert banana): 103998682
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Entry
103998682 CDS
T03447
Name
(RefSeq) endoribonuclease Dicer homolog 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103998682
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103998682
microRNA pathway
RISC loading complex
103998682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
DND1_DSRM
ResIII
dsrm
PAZ
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103998682
NCBI-ProteinID:
XP_009418500
LinkDB
All DBs
Position
BXJ2-9:complement(43216520..43250085)
Genome browser
AA seq
1641 aa
AA seq
DB search
MDGNSTAPNRVKDPRTIARKYQMDLCKRAVEENIIVYLGTGCGKTHIAVLLMYELGHLIR
KPSKSICIFLAPTVPLVRQQAMVIESSTDFKVRCHYGSQKNLKDHDDWNKEIDQSEVLVM
TPQILLQNLRHCFIRMDLVALLIFDECHHAQAPTRHPYAQIMREFYKTKGDGSKCPRVFG
MTASPIIGKGGTDLSNYTKCINSLENLLDAKVCSVDDESELEGFVASPDIKVYYYGPLFY
TASSLTFVYSKKLEDIKVQCISMLKDKLCDFRECQNQIKLLHRLHDNIIFCLEQIGLFGA
IRAARKADMPETEIVSINNDNFLIDQYLTKALSILIGDLLDGNNDVDSLTIGALEEPFFS
NKLAVLVGILASYRLQATAKCIIFVKRIIVAKSLAYILGSLESLKFWKCEFLVGCHGGKE
SMSRGKMNTIVERFSSGEVNLLVATNVAEEGLDIQTCCLVVRFDLPETVASFIQSRGRAR
MTISEYVFLVERGNEREGKLLNDFMAGEDIMNKEITSRTSSETFDDLEEVNYKVSSTGAS
INTGCSVSLLHRYCDKLPRDKYFTPSPKFYYVDDLNGTICRIILPPNAPLRQVDGLPCSS
KDEAKRNACLKACKELHERGALTDYLLPDINPRRKIGPATHHSEYNSNSIEDESSREELY
ELLVPAALRRSWSNDDTNINLHFYYIRFIPKPKDRQYRMFGLFIKNPLPQEAESLKVDLH
LTHGRIVETTLTPQGMTTFDKEEIMLAQNFQEMFLKIILDRSEFYSDLVPLGKCNASQDC
SSKSYLLLPVIEQLYEGQKMIDWTTVRCCLTSPAFIDVSAKFEKDPCRTSEKLQLINGSV
NKTDVVNSLVFTPHNNLFFFVDGILYETNANSCYKGTKCESYAEYYRDRFHIKLSYPEQP
FLKAKQLFVCRNLLHNRVQANTEARELVEHFVELPPELCSLKIVGFSKDIGSTLSLLPSL
MHRMENLLVAIELKEVLSSSFPEASEVRADRILEALTTEKCLERLSLERFEVLGDSFLKY
AVARHSFLTYEAFDEGQLTRRRSSIVNNSNLYELAIAKKLQVYIRDELFDPTQFFALGRP
CKMVCNIDTKSVIHQEENENLNIAAEGHNFRCTKSHHWLHRKTIADVVEALVGAFLVESG
FKGAIAFLRWIGISVDFDVSNIYRVWESSNSNLSLISNRNVNELEEILGYTFRCKGLLLQ
AFVHASYNKHSGGCYQKLEFLGDAVLEYLITSYLYSVFPELKPGQITDLRSITVNNNSFA
NVAVWRSLHKYLMKDARSLDEAINKFESFVLLSDLEKDLIEEPACPKVLGDIVESCVGAV
LLDTGFNLKIVWNLMLSLLGPVLDFSSFQINPLRELRELCQYFNFAMRLPDPVKVGGDYC
VKVEADVKDEHLMFTSTNKNSKTARRMAAQEVLSMLKARGYKLKSKPLEDIVQSAKKDKP
KLIGYDEEPIVIDNLDSIPLEKLQIQTTEETPHSLGLEKANGASLLNCSGNSWSSRKELT
RADASESCNGNHGQIQQTVSDYVEISGTSPGGNHTETAGALAHKTAKSRLMEICATNHWR
DPLFECCKEEGPSHLKMFTYKVTVEVEHESSVCLECFSEPRPQKKAAQDHAAEGALWYLR
HIGIQPAACEILIIFEKLWTL
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaactcgacagctccaaatagagtcaaagatccgagaaccatagcaagaaag
taccagatggacctttgcaagagggccgtggaggagaacatcatcgtttacctcgggacg
gggtgtgggaagacgcacatcgccgtgctgctcatgtacgagctcggtcatctcatccga
aagccgagcaagagcatctgcatcttcctcgctcccaccgtccctctcgtccggcagcaa
gcaatggtcatagagagctccacagatttcaaagttcgttgtcactatggaagtcagaag
aatttaaaggaccatgatgactggaataaggaaattgaccaatctgaggtgcttgttatg
acaccacagatattgttgcaaaatttgcgccattgtttcattaggatggatctagttgct
ttgctcatttttgatgaatgtcatcatgcacaagcacccacgaggcatccctatgcacaa
atcatgagggaattctacaaaactaaaggtgatggttcaaagtgtccccgtgtatttggc
atgacagcttcccctatcattggaaaaggaggaaccgatctatcaaactataccaaatgc
attaacagtcttgagaatttacttgatgcgaaggtgtgctctgttgatgatgaatcggaa
cttgaaggttttgttgcttctccagatattaaggtctactactatggtccacttttctac
actgcttcaagtctcactttcgtttacagtaaaaagcttgaggatataaaagtccagtgc
atatccatgcttaaagacaagttatgtgattttagagagtgtcagaatcagataaagctt
ttgcataggttgcatgataacatcattttctgtcttgagcagattggactttttggagct
ataagagctgcaagaaaagctgacatgccagaaacagagattgtcagtattaacaatgac
aacttccttatagatcaatatttaactaaggcattgtctattttaattggtgacttattg
gatggtaataatgatgttgattctttaaccatcggagctttagaggagccattcttctca
aataagttggcagttcttgttggtattcttgcatcctataggttacaagcaaccgcaaaa
tgtataatttttgtgaagagaattattgttgcaaaatcgttagcatatatccttgggagc
ttagagtctcttaaattttggaaatgtgagttccttgtgggttgtcatggtggaaaagag
agcatgtctcgtggaaagatgaacaccattgttgaaaggttttcttctggggaggtgaat
cttctggttgctactaatgtagctgaagaaggacttgatattcaaacctgttgtcttgtt
gtgagatttgatctgcccgaaactgtagcaagttttatacagtctagaggacgtgctcgg
atgacaatatccgaatatgtgtttctcgtagagagagggaatgaacgtgaaggaaaactg
ctgaatgattttatggctggtgaggatatcatgaacaaggaaattaccagtagaacatca
agcgaaacctttgatgatttggaggaggttaactataaagtcagtagtactggtgcctca
atcaatacaggttgtagtgtttcactcctccatcgttattgtgacaaacttccgcgggat
aaatatttcactccttcacctaagttttattacgtcgatgacctaaatgggactatctgc
agaattattcttccaccaaatgctcccttgcgtcaggttgatggtctaccctgctcctca
aaggatgaagctaagagaaatgcatgtttgaaagcatgtaaagagcttcatgagagaggt
gctttgacagattatcttttgcctgatataaatcctcgaagaaagattggaccagcaaca
caccattctgagtataatagcaacagcattgaagatgaatcttcaagagaggagctttat
gagttgctagtaccagctgctcttagaagatcatggtctaatgatgatactaacataaat
ttgcatttttattatattagatttatccctaagccaaaagacagacagtaccggatgttt
ggtctttttatcaagaatcctcttcctcaagaagctgaaagtttaaaagttgatttacat
cttacccatggtagaattgttgagacaacactcactcctcaagggatgacaacatttgac
aaagaggagattatgcttgcacaaaatttccaggagatgtttctcaaaattatacttgac
agatcagaattttactcagaccttgttcctttgggaaagtgcaatgcaagtcaagattgc
tcatcaaagtcatatctcttgctcccagtcattgagcaactttacgagggacagaagatg
attgactggacaactgtgagatgttgtttaacatcaccagcctttatagatgtgtcagcc
aagtttgagaaagatccttgtcgcacaagtgagaaattacaacttatcaatggctcagta
aataaaactgatgtcgtgaacagcttggttttcactccacacaataatctgttctttttt
gttgacgggattctttatgaaacaaatgctaatagctgctacaagggtacaaaatgtgaa
agctatgcagaatactacagggataggttccatatcaagctttcatatccagaacagcct
ttcttgaaggccaaacagctctttgtttgccggaacttactccataacagagtacaagca
aatacagaagcccgtgaactagtggagcattttgtggagttgcctccagaactttgttct
ttaaaaatagttggcttctcaaaagacattgggagtactttgtctttattgccatctctg
atgcatcgcatggaaaatcttcttgttgctattgaactaaaggaagtactatcctcatct
ttcccagaggcatctgaagttagagcagaccgtatactagaagcacttactacagaaaag
tgcttggaacgcctctctcttgagaggtttgaagtgcttggtgattctttcttgaagtat
gcagttgctcgtcacagctttcttacttatgaagcctttgatgaaggacagttgaccagg
aggagatctagtattgtgaataattcaaatctgtatgagctagcaattgcaaaaaaatta
caggtctacattcgtgacgagctgtttgatccaacacaattctttgcattgggccgtcct
tgtaaaatggtttgcaatatagatacaaaatcagtgattcatcaagaagaaaatgagaat
ctgaatattgcagctgaaggacataattttagatgcaccaaatcccaccattggctgcac
aggaaaaccattgcagatgttgtcgaagctcttgttggagctttccttgttgaaagtgga
ttcaaaggtgcaattgcatttctccgctggattgggatatcagttgattttgatgtatca
aatatttatagagtttgggagtcaagtaatagcaatctttcactcatcagtaatagaaat
gtcaatgagctggaagaaattctaggttatacatttcgatgtaaaggccttctgcttcaa
gcattcgtgcatgcttcctacaataagcactctggcggatgttaccagaaactggagttt
cttggagatgctgtcttggagtacttgattacatcatacctatattctgttttcccagaa
ttgaagccaggtcaaataacagatttacggtcaataacagtcaacaacaactcttttgca
aatgtagcagtttggcggtccctccataagtatctaatgaaagatgcaaggagtctcgat
gaggccataaataagtttgaaagttttgttcttttgtctgatctagaaaaggacttgatt
gaggaaccagcatgtccgaaggtacttggtgatattgttgaatcttgtgttggtgctgta
cttctggacactggatttaacttaaagattgtctggaatttgatgcttagcctactcgga
cctgtcttggatttttctagttttcagataaatcctcttagagaacttcgtgaactttgt
cagtattttaattttgcaatgaggctcccagatccagttaaagttggaggagattattgt
gtcaaagtagaagctgatgtaaaagatgaacatttgatgttcacatcaactaacaaaaac
tcaaaaactgctagaagaatggctgcacaagaagtactttctatgttgaaggctcgtggc
tacaagcttaaaagtaaaccactggaggatatcgtgcagtcagctaaaaaagacaaaccc
aaactaataggatatgatgaagaacctatagtaattgacaatttggattccattcctttg
gagaaactgcaaatccagactacagaagagactccacactcattaggtcttgaaaaagca
aatggtgcatctttgttgaattgcagtggaaattcctggtcatctagaaaggaattgact
agagctgatgccagcgagtcttgtaacggaaaccatggccaaattcaacaaacagtgagt
gattatgttgagatcagtggaacatccccaggtggcaatcatacggagaccgctggtgct
ttggctcacaaaacagccaagtcacggctgatggagatatgtgctactaaccactggcgt
gatccattgtttgaatgctgtaaggaagaaggtcctagccatctgaaaatgtttacttac
aaggttactgttgaagtcgaacatgagtcttctgtgtgcttggagtgcttcagtgaacct
aggccacaaaagaaagccgcccaagaccatgctgcagaaggtgcactctggtatctaagg
catattggtatacagcctgcagcctgtgagattttaattatttttgaaaagctttggact
ctgtga
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integrated database retrieval system
