Musa acuminata (wild Malaysian banana): 103998782
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Entry
103998782 CDS
T03447
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103998782
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103998782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103998782
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103998782
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103998782
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
103998782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
103998782
NCBI-ProteinID:
XP_009418639
UniProt:
A0A804KN48
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Position
9:28511538..28513161
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AA seq
374 aa
AA seq
DB search
MNHSPAVSGPPQEPSEQQQQAAHEERARCEWNFRLSAAVSPAATGAISDAIGTVEFDPTD
RLLAAGGIARKIRIYGLRSLLPEERGPSPTFSDHSTACRLCICTPAKLSSLRWRPDSSGR
IIGSGDYDGVVTEYDVERGFPVFERDEHAGRRVWCVDYSVDGALGASGSDDGTVQLWDSR
CADGGCTAVARADGAVCSVEFDPEGGPWVGVGSADRHAYVFDLRAVSAGPVAALSGHGRT
VTYVRFAPGGRRVVTSGIDGSHRLWDWAEGRQVRAYRGHANSRNFIGMSVWRGAGLIGSG
SESNEVFVYDLRWGEPIWVQGFGNRGEEGQSRDGFVGVASWRQSAAGDGEGALAAGGSDG
VLQVFVGRKMTGSD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattccccagcagtctccggtccgccgcaggagccgtcggaacagcaacaacaa
gctgcgcatgaagagagagctcggtgcgaatggaacttccgtctctcggctgctgtctcc
ccggcggctaccggagccatctccgacgccatcggcaccgtcgagttcgaccccaccgac
cgcctcctcgccgcaggcggcatcgctagaaagatcaggatatacggcctccgcagcttg
ctgccggaagagcgcggtccgagccccaccttctccgaccactcgactgcctgtcggctg
tgtatctgcacgccggccaagctcagcagcctgcggtggcggcccgactcgagtggccgc
atcattggttccggcgactacgacggcgtggtcaccgagtacgacgtggagcggggcttc
cccgtgttcgagcgtgacgagcatgccgggcgccgcgtctggtgcgtggactactccgtt
gacggggccctcggcgcttcggggtccgacgacggcaccgtgcagctatgggactcgagg
tgcgccgacggcggatgcacggcggtcgcacgcgccgacggagcggtctgcagcgtggaa
tttgacccggagggcgggccgtgggtcggggtggggagcgccgaccggcacgcgtacgtg
ttcgatctgcgggcggtctctgcagggccagtggcggcgctcagtgggcatgggcggacg
gtgacgtacgtgcggttcgcgccgggagggcggcgggtggtcacgtcggggattgacggc
tcccaccgactgtgggactgggcggaggggaggcaagtccgggcgtaccgcggccacgcc
aactcgcgtaacttcatcggcatgtcggtgtggcgcggcgcggggctcatcgggagcggg
tcggagagcaacgaggtgttcgtgtacgatctccggtggggggagccaatatgggtgcag
ggcttcgggaaccgaggggaggaggggcagagccgcgacgggttcgtcggggtggcgagc
tggaggcaatcggccgcaggggacggcgagggcgcgctcgctgcaggcggatccgatggg
gtgttgcaggtgttcgttgggaggaagatgacgggatctgactga
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