Musa acuminata (dessert banana): 103998787
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Entry
103998787 CDS
T03447
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mus04812
]
103998787
Cytoskeleton proteins [BR:
mus04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103998787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SPT8
eIF2A
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
VPS8_N
WDR54
Motif
Other DBs
NCBI-GeneID:
103998787
NCBI-ProteinID:
XP_009418645
UniProt:
A0A804KN53
LinkDB
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Position
BXJ2-9:44377735..44390116
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AA seq
775 aa
AA seq
DB search
MATTKRAYKLQEFVAHSSNVNCLKIGRKTSRVLVTGGDDNKVNIWAIGKPNAIMSLSGHM
SAVESVSFDSSEVLVAAGAASGSIKLWDLEEAKIVRTLTGHRSNCIAVDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIKFTPDGRWVVSGGEDNIVKLWDLTAGKLLH
DFKLHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRSMTFNPDG
RTLLCGLHESLKIFSWEPIRCHDAVDVGWSRLSDMNIHEGKLLGCSYNQSCVGVWVVDLS
RIEPYAIASAVITNGHSELKSTSSGNLSLQADNNIKSSMGRLSISQSSEPNSKETKQVAS
AAVVPGTPQRIATSAGQKATTITTAPVVTSVKRSSSKAQATTNLPTINKSEIIPVVVPRT
SPRFELSSDSTKSTGVGRTVPYDIQSKFANFQKVSNIRDDSDKSDMSVQSVGTEHNELLE
QTAISSCNAVTQPVIAGENNLNDIKRVRTRRLGANLFRESSANYDQENYSIRVHKPKEAC
SFDVPKGGRTKSLVANWERRERSPTYDGPRLSSSSETMAGANSLYSLRGHNQIAEKEIVP
AASDEDAISFVLEKHDQFLNVAQSRLTKLQIVYRLWERNDIKGVISAIEKMSDHAVSADV
LSSLMDKSDIITLDICTALLPLLTSLLESKMDRHLGISLEMLLKLVRIFGPVISSTLSAG
PSVGVDLQAEQRLERCNLCFIELEKVKHRISLLIRRGGSIAKSAKELNLALQNML
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccaagcgcgcctacaagttacaggaatttgtggcacattcttccaatgtc
aactgcctaaagattggaaggaagacttcgagggttcttgttactggaggagatgataac
aaggtcaatatttgggctattggaaaacccaatgccataatgagcttatctggtcatatg
agtgcggttgagtcagtaagttttgattcttcagaggtgttggtggctgctggtgcagct
agtggctcaataaagttgtgggatttggaagaggcaaagatcgttcgcacgctaactggc
cacaggtctaactgtatagctgttgactttcatccatttggagagttctttgcttctggg
tcactggatacaaatctaaaaatatgggatatcagaagaaaaggatgcatccatacatac
aaaggtcacacacgaggggttaatgccattaaattcacccctgatgggcggtgggttgtt
tctggcggggaagacaatattgtgaagctttgggatcttactgctggaaagcttttacat
gatttcaagctccatgagggccagattcagtgcattgattttcatcctaatgagtttctg
ctggcaacaggctcagctgatagaactgttaagttctgggatcttgaaacttttgagtta
atagggtctgctggacctgagacttctggtgtgcgttctatgacatttaatcctgatggg
agaactttgctttgtggattgcatgaaagtctgaagattttttcttgggaaccaataaga
tgccatgatgcagtggatgtgggatggtctagactatcagatatgaatattcatgaggga
aaacttcttggatgttcatacaatcaaagctgtgttggagtatgggttgtagacctctct
cgtattgagccatatgcaattgctagtgctgttataacaaatggtcactcagaattaaag
tctacatcaagtggtaatctgtctctgcaagctgataacaacataaagtctagtatgggg
aggctatcgatatcgcaaagttcagaaccaaattctaaggagacaaaacaagtagcatca
gctgcagtcgttcctggtactcctcaaagaattgcaacaagtgctggccaaaaagcaact
acaataacaacagcacctgttgttacttctgtaaaaagaagttcatcaaaagctcaggct
acgaccaatcttcctaccatcaacaaatctgaaataattcctgttgttgtcccaagaact
agccccagatttgagctgtcctctgattctaccaagagcactggggttggaagaacagta
ccatatgatatccaatcaaaatttgctaattttcagaaggtgtcgaacatcagggacgat
tcagacaaatcagatatgtccgttcagtctgtgggtactgaacataatgaacttttggaa
caaactgctatttcttcttgcaatgctgtaactcaaccagtgattgctggagaaaataac
ttgaatgatattaaacgtgttagaacaaggaggttaggagcaaacctattcagagaatca
agtgcaaattatgatcaggagaactatagcattagagtccataagccaaaggaagcctgc
tcttttgatgttccaaaaggaggaagaactaagtcacttgttgcaaactgggaaaggagg
gaacgttctccaacctatgatggaccaagattaagtagttcctctgagacaatggccggt
gctaactccttgtattctttgaggggtcacaatcaaattgctgaaaaggagatcgtacct
gctgcttctgatgaagatgctatttcttttgtattggaaaaacatgaccagttcttaaat
gtggcacagtctcgattgaccaaactacagatagtttaccgactttgggaaagaaatgac
atcaagggtgttattagtgcaatcgagaagatgtctgatcatgctgtctctgctgatgta
ttaagttctctaatggataaaagtgatatcatcactctggatatatgcacagctctattg
cctctcctcactagccttcttgaaagtaagatggataggcatcttggtatttcgttggaa
atgttgctgaagcttgtgaggatctttggtcctgtgatcagttcaaccttgtcagcaggt
ccgtctgttggtgttgatcttcaagcagagcagaggctggaacggtgcaacttgtgcttc
attgagctggagaaggtcaaacataggatttctttactgataagacgaggagggtccatt
gcaaagtctgcgaaggagctgaatcttgccctccagaacatgttgtga
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