Musa acuminata (dessert banana): 103999309
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Entry
103999309 CDS
T03447
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103999309
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
103999309
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103999309
03036 Chromosome and associated proteins [BR:
mus03036
]
103999309
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103999309
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103999309
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103999309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
103999309
NCBI-ProteinID:
XP_009419307
UniProt:
A0A804KQ19
LinkDB
All DBs
Position
BXJ2-9:48576292..48595754
Genome browser
AA seq
512 aa
AA seq
DB search
MKGNGAEGAGPPAESSCPPPLEWKFSQVFGERIAGEEVQEVDIISAIEFDKSGDHLATGD
RGGRVVLFERTDVKNYGSRKDMEKQDHSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIKWCQTANHALFLLSTNDKTIKYWKVEEKKVKKISEMNVDAFQAVGNGSISSSSMTSP
IGYLPNGGCSERPYGHFSYDLSFPPGGFPSLRLPVVVTSQETSLIARCRRIYSHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
MLAYSSSKGSIRLIDLRQSALCDNHSKMFEEREAPGSRSFFTEIIASISDIKFARDGRHI
LSRDYMTLKLWDINMDSSPVAIFQVHEYLRPKLCDLYENDSIFDKFDCCLSGDGMHVATG
SYSNLFRVFGCIPGCNEATTLEASKNPLRRQVQIPSRPARSLNSFRQGAESPGIDMNGNS
YDFTTKLLHLAWHPSENSVACAAMNSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaatggggccgagggcgctgggccgccggcggagtcgtcctgcccgccgccg
ctggagtggaagttttcgcaggtgttcggggagcggatagcgggggaggaggtgcaggaa
gttgatattatctcggccattgaatttgataaatctggagaccatcttgccactggagat
cgaggaggacgtgttgttttatttgaaaggacagatgttaagaattatggctcccgaaag
gacatggagaaacaagatcattcaattagtaggcaccctgagtttcgctacaaaactgag
tttcaaagccatgaacctgagtttgactatcttaaaagcttggaaatagaggagaagatc
aataaaatcaaatggtgtcaaacagccaatcatgctctttttcttctttctactaatgac
aagacaattaaatactggaaggtggaagaaaaaaaagtcaagaagatttctgagatgaat
gtggatgcttttcaagctgtaggaaatggcagcatttctagctcaagcatgactagtcct
ataggatatcttccaaatggcggatgttctgaaagaccgtacggtcactttagctatgac
ttatcgtttcctcctggagggtttccatccctacgtctgccagtggtagtgacaagtcaa
gagacaagtctcattgctagatgtagaaggatatattctcatgctcatgattaccacata
aactccatttcaaataacagtgatggtgagacgttcatatcagcagatgatctgcgaata
aatctttggaatttggaaatcagtaatcaaagctttaatattgttgatgtgaagcctgca
aatatggaggatttaactgaggttataacatcagctgagttccatccaacccattgtaat
atgctggcatatagtagctcaaagggctcaatccggcttatagacctgcgacagtcggca
ttatgtgataaccattctaagatgttcgaagaacgagaggcacctggttcaagatctttt
ttcacggagatcattgcctcgatttcagatattaaatttgcaagggatggaaggcacatc
cttagtcgtgactatatgactcttaagctatgggacataaacatggactcaagtcctgtt
gcaatttttcaggtccatgagtatttaaggcctaagttatgtgatttatatgagaatgat
tcaatatttgacaaatttgattgctgcctaagtggagatgggatgcatgtggcaactggt
tcttacagcaatctttttcgtgtatttggctgtattcctggatgcaatgaagcaactact
ttggaagccagtaaaaatccgttgaggcgacaagtgcaaatcccgtcgaggcctgcaaga
tcgctgaacagctttagacaaggagcagaaagcccaggaatcgatatgaatggaaattca
tatgattttacaacaaaattgctccatttagcatggcacccaagtgaaaattcagttgcc
tgtgctgctatgaacagtttgtacatgtactatgcatga
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