Musa acuminata (dessert banana): 104000225
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Entry
104000225 CDS
T03447
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104000225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
104000225
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104000225
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104000225
NCBI-ProteinID:
XP_009420488
UniProt:
A0A804HYL5
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Position
BXJ2-2:complement(19304079..19309840)
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AA seq
350 aa
AA seq
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MVSGSGEKMEVEPELVMCWKDLPMELLLRILSLVDDRMVIVSSTVCTGWRDAIGFGLTSL
SLSWCKNNMNNLVRSLAPKFTKLQVLTLRQNNAPQLEDSAVEAVANYCHDLRELDLSKSL
RLTDQSLYALGHGCPCLNKLNISGCSAFTDSALAYLASCCRNLKTLNLCGCARAATDRAL
QAVSRHCSELQSLNLGWCESVSDKGVTSLAAGCPNLRALDLCGCVLITDESVIAIANCCP
HLRSLDLYYCQNITDRAMYSLANSQYGLWRDDAGSSNSNDNAGLVNLNISQCTALTAAAV
QAVCDTFPLLHTCPGRHSLIISGCLSLTSVRCACAIHAHRAGRALADHAY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctggtagtggagagaagatggaggttgaaccagaacttgtgatgtgctggaag
gaccttccgatggagctgctgctgcgtattctttcccttgtcgacgaccgaatggtgatc
gtgtcttcaaccgtttgtactggctggagagacgcaatcggctttgggcttacaagtctc
tctttatcgtggtgcaaaaacaacatgaacaaccttgtgcggtcacttgctcccaagttc
acgaagcttcaagttttaactcttcgacaaaataatgcacctcaacttgaggacagtgct
gttgaggcagttgctaattactgccatgacctgagggaactagaccttagcaaaagcctt
aggctgactgaccagtctttgtatgctctaggccatggatgtccctgcctaaataaactg
aatatcagtggatgctctgcttttaccgactctgcccttgcatatcttgctagttgctgt
cgaaacctgaaaaccttgaatctctgtggatgtgcgagagctgctactgacagagcttta
caagctgtatcacgtcattgcagtgagcttcagtctttgaatctaggttggtgtgagagt
gtcagtgacaaaggagtcaccagtttggcagctggttgcccaaatctcagggcattggac
ttgtgtggctgtgtcctcataacagatgagagtgtgattgccatagcaaattgctgccct
catctcagatcactggacttgtattattgtcagaacatcacagacagggcaatgtactcg
cttgcgaatagccagtacgggttgtggcgagacgatgctggcagcagtaacagcaatgac
aacgctgggctggtgaaccttaacatcagccagtgcacagcactgacggctgccgccgtc
caagccgtgtgcgacacattcccattgctgcacacctgcccagggaggcattcactcatc
atcagcggttgcctcagcctcacttctgtgcgctgtgcttgtgccatccatgctcaccgt
gcaggcagagctctagcagaccacgcctactga
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