Musa acuminata (dessert banana): 104000418
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Entry
104000418 CDS
T03447
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3 isoform X1
KO
K03255
protein TIF31
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mus03012
]
104000418
Translation factors [BR:
mus03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104000418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
PAM2
CLU
TPR_8
TPR_16
SAM_7
Motif
Other DBs
NCBI-GeneID:
104000418
NCBI-ProteinID:
XP_009420729
UniProt:
A0A804KUA5
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Position
BXJ2-10:complement(23179700..23193401)
Genome browser
AA seq
1700 aa
AA seq
DB search
MAPKAGRGRGNRARGDKKKKEEKIVPAAIDVTVVTPYESQVTLKGISTDRILDVRRLLSS
NTGTCHLTNYSLMHVARGQRLTDGVEIVSLKPCVLRMVEEEYVREEQVVAHVRRLLDIMA
CTTAFGKHKKQQQQQQHTRSTIRPTRGSTSEVSIPAMSDKFDMAAIHPPPKLADFYDFFS
FSHLPPPILFIRRREGGRSAGEGQEGDFFELEVKVCNGKLINVVASVKGFYMTGKRSIFC
HSLVDLLQQLSTAFANAYDSLMKAFVDHNKFGNLPYGLRANTWLVPPVFVDSSAKCSSLP
VEDEKWGGNGGGHRLDGKDVLRPWATEFSILAKIPCKTEEERLIRDRKAFLLHNLFVDTA
IFKAVSTIRCLMNSNIGLSKLQGSSLHEEQTGDLSIVVKRDCSDASMKFEDKIEGSQLLD
LCTEEVARRNLLKGLTADESVAIKDTRTLGVVIVKYCGYTATVKVSGHAKDSSSEKENIN
LDDQPDGGSNALNINSLRVLLRRSSTTEPSGGRQSSSDTNDMSSARSLVRRVLGDSLRKF
QKLPHSMERSIRWELGASWLQHLQQKDNSATVEPKDNSKDSSTEPIVKGLGKQFEQLKRI
KKKTENAGTISENEDLSSNDKVARKTADSEELKQSDLEEAEEIRKFLPEEAFHHLKDSKT
GLHKKSIEELTKMAHQFYDDIALPKLVADFASLELSPVDGRTLTDFMHIRGLKMCSLGRV
VELAEKLPHIQSICIHEMVTRSFKYIIRAVVAAVENFSDMSAAIAATLNVLVGTSKMEHD
DNDMSSGYSLKMEWVETFLLKRFGWRIKHEFNHLRKFVILRGLCQKVGLELVARNYDMDS
PNPFEKSDIISMVPVCKHVVLSSADGRNLLESSKAALDKGKLDDAVSFGTKALTKMIAVC
GPYHRLTANAYSLLAVVLYHTGDFNQAAIYQQKALDINERELGLDHPDTMKSYGDLSVFY
YRLQHIELALKYVNRALYLLHFSCGLSHPNSAATYINVAMMEEGMGNVHVALRYLHEALK
CNKRLLGPDHIQTAASYHAIAIALSMMEAYTLSVQHEQTTLQILQAKLGSEDLRTQDATA
WLEYFESKALEQQEAARRGIPKPDASIASKGHLSVSDLLDYINPDQDSKERDGKRKQRHP
SFLMQNNSRSIHEQSITNIEALNDEQLTIKEEPIQLREFKDDLPEKSKEHDSVVLCKFTQ
EDMVSPDESSDEGWQEATSKGRSGQVRRNMGPKRPDVHKLTLSNSQIASSTSASFKMKSL
SPAAKMALRTSPTDPSYAGNTRKDGSLTSGEDANRSQIKTVDADALSEQSTKASGSGRLA
MVASKFVSYKEVAISPPGTVLRSTLEQAEEKEMDNSKENPSLLEISEEEVKLTEATSHSE
TSSNDIEKEAHSSGVDTSNITEKGDSAALQDLAPSKIATTNGSKLSASAPPFNPGSLLSM
SHPYNSVAIRGSYDMRVSNQTTPQPLRILPQSVDSRVPCGPRSTLYYKSGHSFRKKHFHS
NSQKAFTSSSNPGSSIMNPHAAEFVPGKALEQQDHSDGSPEAQIPGTEQKEQLQPVMTAN
DKTTVVLSEERSEIEEVSDEGKNKISKGKDTIQTSQRTELARQILLSFIVRSVKDSLSTT
VEAQCTLESPTQTHTRTNEGNTSNIANTKYGHQANDHGLSKHADKNKDTEGFTVVSKRRR
NKQQLANAVSGLYTQQSICT
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaggctggccgtggaagaggtaaccgagccagaggtgacaagaagaagaag
gaagagaagattgtgcctgctgctattgatgtcacagtggtcacaccctatgagtcgcag
gtgacactcaagggaatatccactgataggatactggatgtgagaaggctgctaagctcc
aacacaggaacttgccatctaaccaattactccctcatgcatgtggcacgaggccagcga
ctgactgatggcgtggaaatcgtgtctctgaagccgtgcgtcctgaggatggtggaagag
gagtacgtgagggaggaacaggttgttgcacacgtgcgacggctgttggacatcatggcc
tgcaccacagcattcgggaaacacaagaagcagcagcagcagcaacagcatacacggagc
acgattaggcccacgaggggctcgacctcggaagtttctattcccgcgatgtccgataag
ttcgacatggcggcgatccacccgcctcccaagctcgccgacttctatgatttcttctcc
ttctcccacctccctcctccaattctatttataagaagacgtgagggtgggaggagcgct
ggggaggggcaggaaggcgacttttttgagctagaggttaaggtttgcaatgggaagcta
attaatgtggttgcctctgtcaaagggttttatatgactggaaaacgttctatcttttgc
cactctctggtggatctgttgcaacagcttagcactgcatttgcaaatgcatatgactca
ttgatgaaagcttttgtagaccataacaagtttggtaatctgccgtatggactccgtgca
aatacgtggcttgtgccccctgtttttgttgattcttccgcgaaatgttcctcgctgcca
gttgaagatgagaaatggggagggaatggaggtggccatagactggatggtaaggatgtt
cttagaccatgggcaacagaattttcgattttggcaaaaattccatgtaaaactgaagag
gagaggttgatccgagacagaaaggcatttttgctgcacaatctatttgtcgacacagca
atttttaaagccgtgtcaacaattaggtgtctcatgaactccaatataggtctgtctaaa
ttgcaaggctcaagcttacatgaagaacaaacaggggacttgagtatagtagtaaaaagg
gattgcagtgatgcgagtatgaaatttgaggataaaattgagggcagtcaattgcttgac
ctttgcactgaggaggttgcgaggaggaatcttcttaaagggttgactgcagatgaaagc
gtggccataaaagacactagaactttaggagtggtcatagttaaatactgtggatataca
gccactgtaaaggtttcaggccatgcgaaggacagtagtagtgaaaaggagaacattaat
ttagatgatcaaccagatggtggttccaatgctctaaatatcaacagtttgagggtattg
ctacgcagatcatctaccacagaaccatcagggggacgccagtcttcttccgatactaat
gatatgagttcagcaaggtcattagtacgaagagtacttggtgatagcttaagaaagttc
caaaaacttcctcactcaatggaaaggtccatcagatgggagcttggtgcttcctggtta
cagcacttgcagcaaaaggataattcagcaactgtggagcctaaggacaacagcaaagac
agttctactgaaccgattgttaaaggacttgggaagcagtttgaacagttgaaaagaatt
aaaaagaaaacagagaatgcaggtaccatctccgagaatgaagatctaagttctaatgat
aaagttgccagaaaaacagcagattcagaggaattaaaacaaagtgatttggaagaggca
gaagagataaggaaatttttgccagaagaagcatttcatcacttgaaagattcaaaaaca
ggtcttcataaaaagtcaattgaggagctcaccaagatggcacatcaattctatgatgac
attgcacttccgaagctggttgcagattttgcgtcacttgagctttctccagttgatggg
agaactctgactgatttcatgcatatacggggacttaagatgtgttcgttaggacgtgtg
gttgaacttgcagaaaagctgccacatattcagtcaatttgcattcatgagatggttact
cgatccttcaagtacataattcgagctgttgttgcagcagtggagaacttttcagatatg
tctgcagcaattgctgcaactttaaatgtcttggtgggcacatctaaaatggagcatgat
gacaatgacatgagtagtggatatagcctgaaaatggagtgggtggagacctttctttta
aaaagatttggttggaggataaaacatgaatttaatcacttacgtaagtttgtgattctc
cgaggcctttgccaaaaggttggattggagttggttgccagaaactatgacatggatagc
ccaaatccatttgagaaatctgatattatcagcatggttcctgtgtgcaaacatgtggtc
ctctcttctgcagatggaagaaatttactggaatcatcaaaggcagctttggacaaagga
aaactagatgatgctgttagctttggcacaaaggcactaacaaaaatgatagcagtctgt
ggtccatatcatcgattgactgctaacgcctacagtcttcttgcagtcgttctataccat
acaggagattttaatcaggcagccatatatcagcagaaagcactagatattaatgagaga
gaacttggccttgaccatccagataccatgaaaagttatggggatctttctgttttctac
taccgcctccaacatattgaattggctttgaagtacgtgaatcgtgcactctatcttctt
cacttctcatgtgggctttcacatccaaattctgctgcaacatatataaatgttgcaatg
atggaagagggcatggggaatgtccatgtggcactcagatacctccatgaagctcttaaa
tgcaataaaaggttactaggacctgatcacatacagactgctgcaagctaccatgctatt
gcaatagccctctccatgatggaagcctatacactgagtgtgcaacatgaacaaaccaca
ttgcagatacttcaagccaagcttggatcagaagatcttcgcactcaggatgctactgca
tggcttgaatattttgaatcaaaagctttagaacagcaagaagctgctcgaagaggtatc
ccaaagcctgatgcatcgattgccagcaaaggtcatcttagtgtttcagatcttcttgac
tacataaacccagatcaagattcaaaagaaagagatggtaagaggaagcaacgtcatcca
agctttctaatgcagaacaacagtagatccattcacgaacaatccatcacaaacatagaa
gcgctgaatgacgaacaattaactatcaaagaagaacctattcagctgagggaatttaaa
gatgaccttccagagaagtcaaaagaacacgatagtgtggtcctttgtaagttcacacag
gaggacatggtgtcgcctgatgaatcttctgatgaaggctggcaagaagcaacctcaaaa
gggcgttctggacaagtacgaagaaacatgggccccaaaagaccagatgttcataaatta
acgttgagtaactcacagatagcaagctcaaccagtgctagttttaagatgaaaagtttg
tcaccagcagcaaaaatggcactcagaacttctccaactgatccttcttatgcgggaaac
actcgaaaggatggaagtttgactagtggagaagatgcaaatagatcacagattaagact
gttgatgcagatgctttgtcagaacaaagtacaaaagcctctggctctggcaggcttgcg
atggttgcatccaaatttgtatcttacaaagaggtagcaatctcacctcctggaacagtt
ttgaggtcaacattggagcaagcagaagaaaaggagatggacaactcgaaggaaaacccc
agtttgctagagatatcagaggaagaagtaaaactaacagaagccacttctcattcagaa
acatcgagtaatgatattgaaaaagaggcacattcgagtggcgtagatacatcaaatatt
actgaaaaaggtgattctgctgcattgcaagacttggcaccatctaagatagccacaact
aatggaagcaaactttcagcttcagctcctccattcaatccgggatcacttttatctatg
tctcatccatacaactcggttgctataagaggatcgtatgacatgagagtttctaatcag
acaacaccccaaccattgagaatcctccctcagtctgttgattccagagtaccatgtggt
ccaagatcaacactgtactacaaatctggtcattctttccgtaagaaacatttccattcc
aactcccagaaggcatttacaagcagcagtaatccaggtagtagcatcatgaaccctcac
gcggctgagtttgtgcctggtaaagctttggaacaacaagatcattctgatggtagccca
gaggcacaaattcctggaacagaacagaaagagcaactgcaaccagtaatgactgcaaat
gacaaaaccactgtagttctttcagaagagagatcagaaatcgaggaagtttctgatgaa
ggaaagaacaagatcagtaaggggaaagacaccatacaaacttcgcagaggactgagctt
gcgagacaaatcctactcagcttcattgttagatcggtcaaagacagtttgagcaccaca
gttgaagctcagtgtactcttgagtcaccaactcaaactcatactcgaacaaatgaaggg
aacaccagtaacatagccaatacaaagtatggtcatcaagcaaatgatcatggattatcg
aagcatgcagacaagaacaaggacactgaaggattcacagtggtctcgaaaagaagaaga
aacaaacagcagttggcaaatgcagtcagtggtttgtacactcaacaatccatctgcaca
taa
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