Musa acuminata (dessert banana): 104000689
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Entry
104000689 CDS
T03447
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104000689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
104000689
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
104000689
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Pkinase
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_like
Beta-prop_DCAF12
Beta-prop_IFT140_1st
PK_Tyr_Ser-Thr
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
WD40_RFWD3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104000689
NCBI-ProteinID:
XP_009421072
UniProt:
A0A804HXK2
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Position
BXJ2-1:39333258..39348671
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AA seq
1076 aa
AA seq
DB search
MEGPAEVNETFESSVDAPHIKKTENDQPPEQPSPDNAAETHAPLVSQDAEWAEHFTWLQT
PEMFLERMAGGSLNCDPHAHSGPEPHSSDAHSLSNQGEMVEELTLNNYKNPNLSLGSSTS
SGEKTSVRMGLWQNFTRHAGKSRDTATRKSLSMGHNDDVDNRFLPPSGTQRPSLATQSEP
KDSRFPEHVSKIDKHIIPSTTTTKSPAAIRTKVLSASGFQQYLVKTTLKGKGVVYNHQEN
RDEPGVVISRQNIEKPNANLNVTFKSSHSPSCKVDSISFKHLGTSNPYSEGITLREWLKP
KRHKINKAERMHIFEQILDFVDICHSQLLVLQYLRPSYFIKYPSNQVKYIGSFVPQSQME
LPDLVMQDIHHLDHQSKRKRCTDQDKETHEVSVLKLQKFRDHNSDSNEHHTYPFTGGSVG
DDQGEEKEADSFRAGTTGSAFRAVKLEKWHKGHNVNCSPGISSSISQQSISELVKLEEKW
YASPEEINDYVCSSASNIYSLGVFLFELLCCFETWEVQSAAMLDLQHRILPRTFLSESPK
EAGFCLWLLHPDPSSRPMSRDIIQSDLLSERRNFPSLDNSSALIEEEDAEADLLLHFLLS
LKEQKKMQASKLEAQLSYLKADIEEAERRLISKTQLFSDDRGFRSKFIESSSTYYSEKSV
GNAGAISTLCKSNKYEERLMRNIDQLESAYFSRCSRIGTPEFIAAMRSDYDVLKIRDRCS
QLLNDADEATDHLGTFFDGLCKFAQYSKFEVCGSLKNLDIVNSANVICSLSFDRDEDYFA
AAGVSKKIKIFEFGALLNESVDVHYPLIEMTSGSKLSCVCWNDYIKNYLASTDYEGIVQL
WDASTGQGFTKFAEHKRRAWSVNFSVLDPTMLASGSDDCTVKIWSINEKGSLDTIRNVAN
VCCVQLSHSSHLLAFGSADYKIYCYDLRNTRIPWCTLSGHGKAISYVKFLDSETIVSAST
DNTLKLWDLKRTNPSGLSTNACSLTLSGHTNEKNFVGLSVCDGYIVCGSETNEVYAYYKT
FPMPMTSHKFGSIDPNTGQETSDDDGQFVSSVCWRGKSDMVIAANSTGRIKVLQLV
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggaagggccagctgaagtaaatgagacatttgagagctcggtcgatgctcctcatatt
aaaaaaacagagaatgatcaaccaccggagcagccaagccccgacaatgccgcagaaaca
cacgccccacttgtctcacaggatgcagaatgggccgagcacttcacctggctgcagaca
ccagagatgtttcttgaacgtatggctggagggagcttaaattgcgatccacatgcacat
tctgggcctgaaccacatagctcagacgctcactctttgagcaaccaaggagaaatggtg
gaagagctgactctgaataactataagaatcctaatttgtctctgggcagtagcacaagt
agtggggagaaaacatcagtccggatgggcctatggcagaatttcacaagacatgcagga
aaatcgagggacacagcaaccaggaagtccttgtcaatgggtcataatgatgatgtggat
aacaggtttctgcctccgtcgggcacacagaggcctagtctagccacacagtcagagcca
aaagattctaggttccctgagcatgtgtctaagattgacaagcatatcatcccaagtact
actacaacaaaatctcctgctgcaatccggactaaggttctctccgcatctggatttcaa
caatatttggtcaagactacattgaagggtaagggagttgtatataaccatcaagaaaat
cgtgatgagcctggtgttgtgatctctcgtcaaaatattgaaaagcctaatgccaatctg
aacgtgacttttaaatcttcacatagtcctagttgtaaagtggattctatatctttcaaa
catttaggaacttcaaatccctatagcgaaggaattaccttgagggaatggcttaaacct
aagcgccacaagataaataaggctgagcgcatgcatatatttgagcagatcctggatttt
gttgacatctgtcactcccaacttcttgttttgcagtatttacgaccatcatactttatc
aaatatccctccaatcaggttaagtacattgggtcctttgttcctcagagccagatggag
ttaccagatttagtaatgcaagatattcaccatctggatcatcagtcaaaaagaaagagg
tgtacagaccaggacaaggagactcatgaagtttcggtgctgaagcttcagaaatttcgt
gatcataatagtgacagtaatgagcatcacacatatccttttacgggtggttctgtagga
gatgatcaaggtgaagaaaaggaagctgatagttttagagcaggaactactggcagtgct
ttcagggcagtgaaattggagaaatggcataaaggtcataacgtgaattgcagtccaggt
atatctagttctatcagccagcaatccatatctgagctggtgaaattggaggagaagtgg
tatgctagccctgaggagataaatgattatgtgtgctcctctgcatcaaatatctacagt
cttggggtttttctttttgagctattatgctgttttgaaacatgggaagtgcaatctgct
gcaatgttggatttacagcatcggattcttccacgaacctttttgtcagaaagtcccaag
gaagctggcttctgtctttggttgttgcatcctgacccatcttctcggccaatgtcaagg
gatattattcaaagtgacctgttaagtgaacgtagaaattttccatcattagataactca
tcggctttgattgaagaggaagatgcagaagcagatttgttattacactttctcttatct
ttgaaagaacaaaaaaagatgcaggcctcaaaactagaagcacaacttagttatttaaag
gcagatattgaggaggctgaacgaaggctcatatcaaaaacacagttattttctgatgac
agaggtttccgatcaaaatttatagaatcatccagcacttactatagtgaaaaatctgtt
ggtaatgctggagcaatatccacgctatgcaaatcaaataagtatgaggagaggttaatg
aggaacattgatcagcttgaaagtgcatacttttccaggtgctcgaggattggaacacct
gaatttattgctgcaatgcgttctgactatgatgttctcaagatccgtgatagatgctcc
cagctcctgaatgatgctgatgaagcaactgatcatctaggaaccttttttgatggttta
tgcaagtttgctcaatacagtaaatttgaagtttgtggaagtctgaagaatttagacatc
gtcaactctgcaaatgtcatttgttctttgagttttgaccgtgatgaagactattttgct
gcagctggagtatcaaaaaaaattaagattttcgagtttggtgctcttttaaatgagagt
gttgatgttcattacccactgattgaaatgactagtggatccaagctcagctgtgtatgt
tggaatgattatataaagaattatttggcttcaactgattatgaaggcattgttcagttg
tgggatgcaagcaccgggcaaggattcacaaagtttgctgagcataaaagacgagcatgg
tctgtcaatttctcggttttggatccaactatgttggccagtggaagtgatgactgtact
gtgaaaatatggagtatcaatgaaaaaggttctcttgacactatcaggaatgtggccaat
gtgtgttgtgtccagctttcacactcgtctcatctcttggcttttggctctgccgattac
aaaatttactgttatgatctaaggaacactagaattccctggtgtactctgtccggacat
ggaaaggccatcagctacgtgaaattcttagactcggaaacaattgtttcggcatcgacc
gacaacacccttaagctttgggatctcaagagaacaaacccaagtggcttatccaccaat
gcttgcagcctaactttaagtggtcatacaaatgagaagaactttgttggcttgtctgtt
tgtgacgggtatatagtgtgtggttcagagacaaatgaagtttatgcttactataagaca
tttcccatgccaatgacttctcacaagtttggatccattgatccaaatacgggacaagag
acgagcgatgatgatggacagtttgtctcaagtgtctgttggagagggaagtcagatatg
gttattgctgcaaattccacaggaagaataaaagtgttgcagctggtttaa
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integrated database retrieval system