Musa acuminata (dessert banana): 104000823
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Entry
104000823 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104000823
03015 mRNA surveillance pathway
104000823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
104000823
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104000823
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104000823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MazG
Motif
Other DBs
NCBI-GeneID:
104000823
NCBI-ProteinID:
XP_009421236
UniProt:
A0A804KW79
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All DBs
Position
BXJ2-10:27216887..27223153
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AA seq
489 aa
AA seq
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MAENAAPPAKTEEKRSWADEESDEEKEAAAPPSQAADEAQPSELKKIESLSISDGKDSGE
RLLDDPDDSEIKAVTSGDTVYTSAVTFEDLKLSDELIKGLYVEMGFSKPSKIQAITLPMI
LTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPKRKIPQAICICPTRELAQQNHAVLLKMG
KYTGITSMCAIPSDSANYIPINKRPPVTEQVVIGTPGTIKKWTSAKKLSTRDVKILVFDE
ADHMLAEDGFRDDSERIMKEIQRSSGGCQVLLFSATFNESVKAFVSRVIKDGNQIFVKKE
ELTLEKVKQYKVQCPDELSKVEVIKDKIFEFGQKVGQTIIFVRTRNSARMLHQSLTEEGY
ECTSVQGALKQEDRDQIIKEFKDGLTKVLITTDLLARGFDQRQVNLVINYDLPIKHDNPS
EPDCELYLHRVGRTGRFGSKGAVFNFLCTDRDRSVMEKIERHFQHHIPEIPNWRSEEDFE
SALKDAGLL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacgctgcgccgccggcaaagacggaggaaaagcggtcatgggccgacgaa
gagtcggacgaagagaaggaagccgccgcgccgccttcgcaggccgccgacgaagcccaa
ccctcggagttgaagaagatcgagtcgctctccatctccgacgggaaggacagcggtgaa
cgtctgctggatgatcccgacgattcggaaattaaagcggttacatccggtgatactgtc
tacacttctgctgtgacgttcgaagacttgaaattgtcggatgagcttatcaaagggttg
tatgttgagatgggttttagtaagcctagcaaaatacaggctattactctacctatgatt
cttacgcctccgtataaagatttggtagctcaagctcacaatggctcagggaagaccaca
tgttttgtgcttggaatgttgagtcgagtcgatccaaagaggaagataccacaagccatc
tgcatctgccctaccagagagttggctcagcagaatcatgcggtccttctgaagatggga
aagtatactggcataacttcaatgtgtgctattccatctgattctgctaattatattcca
ataaataaacgtccaccagtaactgagcaagtagtgattggcactccgggaaccattaag
aagtggacttcagcaaaaaaattgagcacaagggacgtgaagatacttgtttttgatgag
gcagatcatatgctagccgaggatggctttagggatgattctgaaaggatcatgaaagag
attcaaagaagcagtggtggttgccaggtgcttcttttttctgctacattcaatgaatct
gtcaaggcatttgtatcaagggtaatcaaagatggaaatcaaatatttgtgaagaaagag
gaactcacgttggaaaaagtaaagcaatataaggtccaatgtccagatgaactttccaaa
gtagaagtaataaaggacaaaatttttgaatttggacaaaaagtaggacagactataata
tttgtccgtacaagaaatagtgctcgcatgttacaccaatcgttgactgaagagggctat
gagtgtacatcagttcaaggtgctctcaagcaagaagacagagaccaaattataaaagaa
tttaaagatggattaaccaaagtcctcattacaactgatctccttgctcgaggttttgat
caaagacaggttaatttggttatcaactatgatcttcctataaagcatgacaatccatca
gaaccagattgtgaactatatctacatagagttggtagaactggccgctttggtagcaaa
ggtgctgtcttcaacttcttgtgcactgatagggacaggtcagtcatggagaaaatcgag
cgtcatttccagcatcatattccggagattcctaactggaggagtgaggaagattttgag
tctgctctgaaagatgctggtttgctatga
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