Musa acuminata (dessert banana): 104001042
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Entry
104001042 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC104001042 isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
104001042
Membrane trafficking [BR:
mus04131
]
Protein recycling
Others
Retriever complex
104001042
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
104001042
NCBI-ProteinID:
XP_064985030
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All DBs
Position
BXJ2-10:27776460..27800293
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AA seq
929 aa
AA seq
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MEFRARDYEAEEIACAVPRQPAPDHPLALLASPSSQVLPDFEVCFDDPLRESATDASESI
LDREDGCSTLRSKLSGEADNLLEKEWIFLRSSLMQKFSCGNTITISPTTDAIMRNNKGKN
AGYKTLADIHMEDLDDPESTVKEEIKVITRQEYVSRLQELKSEINQAWIAEDRIRALKLS
IKVARLLTDTSVCQFYPTLFTLVVDVMDMLGNLVWERIKKRTEYADDRTPVCSLPENFTS
DDICSEAKETCYNWFCKIGSIHELVPRIYLELAILRCWRFLEDSFVSIVERLVMMMRGLA
DPLVSAFCHLYLAHCARSLYLGDDGYLIMSLGDISILLRRVLLDKETVGYHSCKNKYFLI
SLIKPAIDWIVKCIFTEGYQNASNILVEFGVGSDLSVSTRKFSCVSVVLHYLLKHLPADV
ISNNAVEIIDFIEQNKDMSVESHLDYRLLGHKLYECQHSLSSVCAVMRRIMQVLGQYDNL
NEYLIIADAYLDIILLYSMENYLGIILDGILKRAHANQVDQIEMENLQSILVKIIDHFDR
LEVVLAMEHFTAILDFLSGSSRNTVYMNILHKATRAGHIGDPTRVQFLFEVSQVLHESID
TSNMNDESKHKADLISRFVGMVNFGAEWEQYLSFLDESRAAFGSIDELKYVLIHSSNNLA
IKSIRDKKKFLGFLKSCLAFSEVTIPSISDSIQRMNLYLETAEIALFGGLISHSEGLVTS
AISCLECLNMTTGSHSSNDVDHISSLTSKLCSLLLMIPGNHEEGSVCLVRNLITTLQGHS
LASSKIKVQVFCAIISLSAGLSQKKFLYHAKNMEVISNDQLYFGDPSFDEELSSIASLVL
QILEDVIKQEMHLVTRGRLALDACNCLLVSFKTSHELSLKCSSLIDIAKSCLHPKEKYLR
STVSLMDRLSSNLGVQVAPSLELTLVVQR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaattcagggctcgcgattacgaagccgaggagatcgcgtgcgctgtcccccggcaa
cccgcacccgaccacccgcttgccctgctcgcctcgccatcttcgcaggttcttcctgat
tttgaggtttgttttgatgatccactgagagaaagtgccacagatgcatcagaatccatt
ctggatcgggaagatggttgcagtaccttgagaagtaagctctcaggagaagccgataat
ttgttagaaaaagaatggatttttctgagaagttcgttgatgcagaagttctcctgcggc
aatacaattactatttcaccgaccacggatgccataatgaggaacaacaaaggaaagaat
gcaggatataaaacgctggcagatatccacatggaggatctggatgatccagaatctact
gtgaaagaggagataaaagtaattacacgacaggaatatgtttcaagattacaagaactt
aagagtgaaattaatcaggcatggatagcagaagatcgcatcagagctttgaagttatcc
atcaaggtggccaggcttctaacagacacttctgtttgccaattttatcctacattattt
acattggttgtagatgtaatggatatgcttggcaatttggtatgggaacgaattaagaag
cggaccgaatatgctgatgacaggacaccagtatgctctttgccagagaactttacatct
gatgatatttgttctgaggcaaaagagacttgttacaattggttttgcaaaattggttca
attcatgaacttgttccgcgtatatatttggagctagccattttacggtgttggcgtttt
ctagaagatagttttgtgtctatcgttgagcggttggttatgatgatgagaggactggct
gatcctcttgtatctgccttttgtcatctttatttggctcactgtgcaagatcgttgtat
ttaggagatgatggatatttgatcatgtctctcggggacatctctattctactgagacgg
gtccttttggataaagaaacagttggataccattcctgcaagaataaatattttcttata
agtttaataaaacctgccattgactggattgtgaagtgtatatttaccgaaggttatcag
aatgccagtaatatacttgtggagtttggtgtgggaagcgatctatcagtttcaaccagg
aagttctcatgtgtctccgtagttcttcattatctccttaaacatcttccagctgatgtt
atcagcaacaatgcagtggaaattatagattttattgaacaaaacaaagatatgtcagtt
gaatctcatttggattataggctccttggacacaaactctacgagtgccaacactcactc
agttctgtttgtgctgtaatgagaagaattatgcaggtacttggtcaatacgataatcta
aatgagtatttgataatagcagatgcttatctagacatcatccttctgtattcaatggag
aactatctaggaatcatattggatggaatcttaaagcgagctcatgcgaatcaggttgat
caaattgaaatggaaaatctgcagtccattcttgtcaagattatcgatcactttgataga
ttggaagttgtgcttgctatggaacatttcacggcaattcttgacttcctatctggaagc
tcacggaacacagtttacatgaatatacttcataaggctactagagctggtcatattggg
gatcccacaagagtacaatttctttttgaagtatctcaagtccttcatgagagcatcgat
acatcaaatatgaatgatgagagtaagcataaagcagatttgatatctagatttgttggt
atggtcaactttggagctgaatgggaacagtatttatcatttttagatgaatctcgtgca
gcttttggtagcattgatgaacttaagtatgttcttatacattcaagcaacaatctagcc
atcaaatctatcagagacaaaaagaagtttcttggatttctcaagtcttgcctggctttc
agtgaagtaacaatcccatccatttctgacagcattcagcgtatgaatctttaccttgag
actgctgagattgcattatttggaggcttgatctcccattcggagggacttgttacttca
gcaatcagttgcttggaatgcttaaacatgacaacaggttctcactcatcaaatgatgta
gatcatatttcctcgttgacttctaaattatgcagtctgttacttatgataccaggtaac
catgaagaagggtctgtgtgtttggtacgaaatctcataacaactctacaaggtcactct
ttggcatcatcaaaaattaaagtgcaggtattctgtgcgatcatatctctatcagcaggt
ctatctcagaaaaagtttttgtaccatgcaaagaacatggaggttataagtaacgatcaa
ctgtattttggggatccgtcctttgatgaagagctttcatctatcgccagtctagttctt
cagatcctagaagatgttattaaacaggagatgcacttggtgacacgaggcagattggct
ctggatgcttgcaactgccttcttgtatcattcaaaacaagtcatgaactctctctaaaa
tgctccagcctgattgatattgccaagtcatgcttgcatccaaaggagaagtatctacga
tcgacagtaagcttgatggacaggctctcctcgaatctcggggtccaagttgcaccttca
ttagaattgacattggttgtgcaacgctaa
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