KEGG   Musa acuminata (dessert banana): 135580756
Entry
135580756         CDS       T03447                                 
Name
(RefSeq) uncharacterized protein LOC135580756
  KO
K12828  splicing factor 3B subunit 1
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135580756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mus03041]
    135580756
   03036 Chromosome and associated proteins [BR:mus03036]
    135580756
Spliceosome [BR:mus03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135580756
 Complex B
    135580756
 Complex C
   U2 SnRNP specific factors
    135580756
Chromosome and associated proteins [BR:mus03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    135580756
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_EF3_N Cnd1 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 135580756
NCBI-ProteinID: XP_064983788
LinkDB
Position
BXJ2-10:8982920..8988315
AA seq 1269 aa
MDHVDAEIAKTQEERRKMEEVAMLTSVTFDADLYGGGPDRFEGYERSIPVTDEEEEADGE
RRDIARRMASYTGPKSLNELPRGSEGEDDSGFKKPQRIIDREDDYRRRRLQRIISPERND
PFATGEATPDPTVRTYADVMREQALQRQKEEILKEIAKKKEEEKSKAAAEPAPAAQKRRN
RWDQSQEPDGGAAKKAKTSSVASDWDAPDSTPGIGRWDATPTPGRVADATPSVSRRNRWD
ETPTPGRLVDADATPAAGGATPGATPAGMTWDATPKLAGLATPTPKRQRSRWDETPATMG
SATPLPGAATPAASFTPGVTPVGGVDLATPTPGAINLRGAMTPEQYNLLRWERDIEERNR
PLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPLGTPLYAIPEENRGQQFDV
PKEAPGGLPFMKQEDYQYFGALLNEEEEEQLSPEEQKERKIMKLLLKVKNGTPPQRKTAL
RQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV
VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVA
SALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLVEIIEHGLSD
ENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPL
MDAVYASYYTKEVMIILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFR
NFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVV
ANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGT
IKWRLNNKSAKVRQQAADLIARIAIVMKQCKEEQLMGHLGVVLYEYLGEEYPEVLGSILG
ALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREW
MRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVA
IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLED
ALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVE
GMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPTLEDEANSVY
SRPELVMFI
NT seq 3810 nt   +upstreamnt  +downstreamnt
atggatcacgtggacgccgagatagcgaagacccaggaggagcggcgaaagatggaggag
gtggccatgctcacttccgtaaccttcgacgccgacctctatggcggcggccccgaccgc
tttgagggctacgagcgctccatccccgtcactgacgaggaggaggaggcggacggtgaa
agacgcgacatcgcccgacggatggcctcctacaccggccccaagtccctcaacgagctc
cccagggggtccgagggcgaggacgactcggggttcaagaagccgcagcggatcatcgat
cgggaggacgattaccggcgccggagactccagcggatcatatcgcccgagaggaacgat
ccctttgccactggggaggccaccccggaccccacggtgaggacgtacgcggatgtgatg
agggaacaggccttgcagcggcagaaagaggagatcttgaaggagatagccaagaagaaa
gaggaggagaagagcaaggctgccgccgagccggcccccgccgcccagaaaaggaggaac
aggtgggaccagtcgcaggagcctgatggcggtgctgccaagaaggcgaagacgagctcg
gtggcatctgactgggatgcaccggattctacacctgggattgggcggtgggatgcaaca
ccgactcctgggagggttgcagatgccactccttctgtctctcggagaaacagatgggac
gagactccaactcctgggagactcgtggatgctgatgctacccccgctgctggtggtgcc
acccctggtgctacaccggccggcatgacatgggatgctactcccaagcttgctggtctt
gcaacgccaacgccgaagcgccagaggtcaaggtgggatgagactccggcaaccatgggt
agtgccactccattgcctggtgctgcgactcctgctgcttcattcactcctggtgtcact
ccggttggtggtgttgatcttgcgacaccgactccaggagcaattaatcttcgtggtgcc
atgaccccagaacagtataatctgctgagatgggagagggatatcgaggagaggaaccgt
ccattgaccgatgaagagctcgatgcaatgttcccccaggaagggtacaagatactggat
cctcctgcatcctatgttcccatcaggactcctgcaaggaagcttttggcaacgcctact
cctttgggcactcccctttatgccatacctgaggaaaatcgtggacagcagtttgatgtc
ccaaaggaggcacctggtgggttgccattcatgaaacaagaggattaccaatactttggg
gctctactgaatgaagaggaggaggagcagctgtctcctgaagaacagaaagagaggaag
atcatgaagctgctgctgaaggtgaaaaatggtacaccaccacagaggaagactgctttg
cgccaactcactgacaaagctagagagtttggtgctggcccattgttcaacaagattctg
cctttgctcatgcagccgactcttgaagaccaggagcgacaccttctagttaaagttatt
gacagggttctgtataagttggatgagctggtccggccttttgttcataagatccttgtg
gttatagagcctcttcttattgatgaggattattatgctcgtgttgaagggagagaaatc
atctcaaatcttagtaaagcagctggtcttgcaactatgatagctgccatgagaccagat
atcgataacattgatgagtatgtgaggaatacgacagctagagcttttagtgtggtggct
tctgctttgggtattcctgctctgttgccgtttctgaaggctgtttgtcagagtaagaaa
tcttggcaagctcggcacactggtattaagattgttcagcagattgctattctaatggga
tgtgccgtgctcccacatcttaggtccctggtcgagattatagagcatggtctcagtgat
gagaatcagaaggtgagaactattactgcattgtctcttgctgcacttgcagaagcagct
gctccatatgggatagaaagctttgattcagtgttgaagcctctttggaagggtatcagg
tctcatcgtgggaaggttcttgctgcctttttgaaggcaattggttttattattcctttg
atggatgctgtttatgcaagttattatacgaaagaagtcatgattatcctcattcgtgag
tttcagtcacctgatgaagaaatgaagaaaattgtgctgaaagttgtcaagcagtgtgta
agtacagagggtgtagaggctgactacatccggaatgatattcttcctgagttcttcagg
aatttctgggttagaaggatggcattggaccgcaggaactacaaacagcttgtggacacg
accgtggagattgcaaataaggttggagtggcggatattgtaggaagaattgtggaagat
cttaaagatgagagtgagccttacaggcgtatggtgatggagacaattgagaaggtggtg
gccaacttgggggcttctgatattgatgctagattggaagagcttcttattgatggaatt
ctgtatgccttccaggagcagacgagtgatgatgccaatgttatgcttaatggatttggg
gctgtggtgaatgcattaggacagagggttaagccgtatcttccccagatttgtggtacc
ataaagtggcgtttgaacaataagagtgccaaagttaggcaacaagctgcagatctaata
gcacggatcgccatcgtcatgaagcagtgcaaggaggagcagctgatgggtcacttgggt
gttgttctgtacgagtatttgggagaagaatatcctgaagtcttaggttctattctggga
gcacttaaagctatagtgaatgtcattggtatgaccaaaatgacacctcctattaaggat
cttctaccccgattgaccccaatcttaaagaacagacatgagaaggtgcaggagaactgt
attgaccttgttggtagaattgctgatcgtggagctgagtttgtgccagctagggagtgg
atgaggatttgttttgagcttcttgagatgttgaaggctcataagaaggggatcagaaga
gctactgtcaacacttttggttatattgctaaagcaattggaccacaagatgtccttgcg
actcttttgaacaatttgaaagtacaagaacgtcaaaaccgtgtgtgcactactgttgct
atcgctatagttgccgaaacttgctccccgtttacagttttgccagctctaatgaatgag
tatcgtgtacctgagctgaatgtgcagaatggagttctgaaatctctttctttcctcttt
gagtacataggtgagatggggaaggattatatatatgccgttactccactgctggaggat
gctttaatggacagggatttggttcatcgtcagactgctgcttctgctgttaagcatatg
gccttgggagttgctgggttaggttgtgaggatgctttagtgcatttactcaattatgtc
tggcccaacatctttgagacttctccccatgttattaatgctgtgatggaagccgttgaa
gggatgagggttgccctgggtgcagctgtaattctaaattactgccttcagggtctgttt
catcctgctaggaaagttagggaggtatattggaagatctacaattcgctttacattgga
tcccaggatgcactagtagctgcttatcccacactagaagatgaagcgaacagtgtctat
agccgaccagaacttgtgatgtttatctga

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