Musa acuminata (dessert banana): 135580771
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Entry
135580771 CDS
T03447
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03420
Nucleotide excision repair
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135580771
09124 Replication and repair
03420 Nucleotide excision repair
135580771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mus03051
]
135580771
03400 DNA repair and recombination proteins [BR:
mus03400
]
135580771
Proteasome [BR:
mus03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
135580771
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135580771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
TECR_N
Ubiquitin_4
Dsc3_N
UBA_3
Motif
Other DBs
NCBI-GeneID:
135580771
NCBI-ProteinID:
XP_064949573
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All DBs
Position
BXJ2-1:12432594..12442399
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AA seq
384 aa
AA seq
DB search
MKLTVKTLKGTQFEIQVQPNDTIMAVKKNIEHVQGKDNYPWGQQLLIHNGKVLKDETTLE
DNKVNENGFLVVMLSKSKAAGVGGASSAQPSATSTVQHPAAEQTPPSVPPQAPPQTQALE
SSATGPGGPQGPNAQVSADAYGQAASSSVEESKLEQMVSQLMEMGGGNWDRETVLLALRA
AYNNPERAVEYLYSGIPATAEIAVPASPFSSSQASPQGASAPDVAASGPLFGVPNSSPLD
MFPQGNTDLGVGAGGGYLDFLRNNQQFLALRAMVQANPQILQPMLQELSKQNPQLLRLIQ
EHHAEFLQLINEPVDEGLEGDLFDQPEEDEMQHTVNVTAEEQEAIGRLEAMGFDRARVLE
AFLACDRNEQLAANYLLEHAGDED
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaacggtgaagacgctcaagggcacccaattcgaaatccaggttcagcccaac
gacacgattatggccgtgaagaaaaatatcgagcatgtacaaggaaaagacaattatcca
tgggggcaacaattgctgattcacaatggaaaagttttgaaagatgaaactacactggaa
gataacaaagttaatgaaaatggttttctagttgtcatgcttagtaagagtaaagctgca
ggtgttggtggagcatcatctgcgcagccctcagcaacttctacagtccagcatcccgct
gctgaacagactccaccatcagttccaccacaagctccgccacaaactcaggccctagag
agttccgcaactgggcctggtggaccccaaggaccaaatgcacaggtatctgctgatgcc
tatggtcaagctgcatccagttcagttgaagagagtaaacttgagcagatggttagtcaa
ttgatggagatgggtggtggtaactgggatagagaaacagttctgcttgcccttcgtgct
gcttacaataacccggagcgtgctgtggagtacctatattctggtattccagcaacagca
gaaattgcagttccagcttctcctttctcttcatctcaggcatctccccaaggagccagt
gcacctgatgtagctgcttcaggtcctctctttggggtaccaaactcgtctcccttggat
atgttcccacagggcaatactgatcttggagtgggtgctggaggtggatatcttgacttc
ctcagaaacaaccaacagttcttagccttgcgagctatggttcaagcaaatccgcaaatt
ttgcagccaatgcttcaggaactcagcaagcaaaaccctcagctattaagattaatacag
gagcatcatgctgagtttcttcagttaataaatgaaccagttgatgaaggtcttgaaggg
gatctttttgatcagcctgaggaagacgagatgcaacatacagtaaatgtgacggctgaa
gagcaggaggcaatcggacgacttgaagcaatgggttttgaccgagctagagttctcgaa
gcattcctagcgtgtgacaggaatgagcagttggcagcaaactatttattggagcatgca
ggtgatgaagattga
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