Musa acuminata (dessert banana): 135580862
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Entry
135580862 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135580862 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135580862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135580862
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135580862
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135580862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
135580862
NCBI-ProteinID:
XP_064963900
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Position
BXJ2-5:complement(1820037..1837713)
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AA seq
906 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSDIKDKKVSASYEQALMDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGDLESQIDNFEAEVEGLSVKKGKTRPPRLTHLETSIARHKA
HILKLELILRLLDNDELSPEQVNDVKDFLEDYVERNQDDFDEFGDVDELYSSLPLEKVEA
LEDLVSLGPSSLAKQGVASVSTASALLGLKNAVASSAAQLSLTQIISQDQGDDAASPESN
ADVAPKTPPSKSGAMVTVVSTVPPGISSGISVGTSSSATANVPVRPSVAGPTVAAILSVP
PNVRGVIENSSAAVSSPPNSSSSLKEDDNMTFPVRRSSPAIPEIGIAKGISRGISNQPSI
STSMTFSSAGGITGNVSLGSVPPLSDLSKRNVLNVDERIGSSGLAQPLLSFPLDNRILLQ
SLPRTNDGAGSNDSSNVGEGSTAGGRVFSPSVVSGIQWRPQSATSFQNASENGQFRGRPE
IAPDQREKFLQRLQQVQQQGHSNLLSGPHLSGASHKQFTTQQQNSLLQQFSPQSTSVSPH
VGLGLGVQGAGLVSVSSAAQQQPTPVLQPSSQHPLVSTVTKDGDSVHDNPEDQQQHNISE
DLIADPASSPSVNKMMSDDDLKTSYVGTSTVAVSEVNQLSRDTDLPPGQPLQPGQSSASL
GVIGRRSGSELGAIGDNISGVAGNSGGMHDQIYNLQMLEAAYYKLPQPRDSERAKNYVPR
HPVVTPSSYPQTQAPIVDNPAFWERLGLDPLGTDALFFAFYYQQSTYQQYLAARELKRQS
WRFHKKFNTWFQRHEEPKVTNDNFERGNYVYFDFHIANDGSQHGWCQRIKTDFTFEYDFL
EDELVV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccagtcggaagctgcagggtgagattgatcgagtgctgaagaaggtccaggaa
ggcgtcgacgtcttcgatagcatatggaacaaggtttacgacacggagaacgcgaaccag
aaggagaaattcgaggcggatctcaagaaggagattaagaagttgcagcggtatcgcgat
caaatcaagacatggatacagtctagcgacatcaaggataagaaggttagtgcctcttat
gagcaggctcttatggatgctcgcaagctcattgaacgtgaaatggaaagatttaaggtt
tgtgagaaggagacaaaaacaaaagccttctccaaggaaggattaggtcagcaacctaag
acagatccaaaagagaaggccaaatcggaaacaagggactggttgaacaatgtggttggg
gatttggagagtcagattgacaattttgaagctgaggttgaagggctttctgtaaagaaa
gggaaaacaagaccacctcggctgacgcatttggaaacatctattgcgaggcacaaagct
cacattttgaaattggagttgattttaagattattggataatgatgaattgagtcctgaa
caggttaatgatgttaaagattttctagaagattatgttgaacggaatcaggacgatttt
gatgaatttggtgatgttgatgagctttacagctctctgccactagaaaaggtggaagcc
ctagaagatcttgtttcacttggtccttccagtcttgctaagcagggcgttgcttctgtt
tcaactgctagtgcacttttaggcttgaagaatgctgtagccagttcggctgctcagtta
tctttaacacagatcatatctcaggaccaaggtgatgatgcagcttctccggaaagtaac
gctgatgttgcaccaaaaaccccaccttcaaaaagtggagctatggtgactgtggtatca
acagttcctcctggtataagttctgggatatcagtggggaccagttcatctgcaactgct
aatgttcctgtgcgtccatcagttgctggaccaacagttgcagctatactttctgtgcca
ccaaatgttcgaggcgttatagagaactcatctgctgctgtttcttctcctcctaattca
tccagctcacttaaggaggatgataatatgaccttccctgtgcgtagatcttcaccagcc
atccctgaaattggaatagcgaaaggcattagccgagggatctctaatcaaccatcaatt
agtacttcgatgactttcagttcagctggtggaatcactggaaatgtttctcttggttct
gttcctccattatctgatttgtctaagcgaaatgtgttaaatgttgatgagagaattggg
agtagtgggcttgcacagcctctgttgtcgtttcctctggataacagaattctcttgcag
tcgttgccaaggaccaatgatggagctggttcaaatgattctagtaatgttggagagggt
tctactgctggaggaagagtcttttcaccttcagttgtctctgggattcaatggagacct
caaagtgcaacttcttttcagaatgcaagtgagaatggccaatttcgtgggcgtcctgag
atagctcctgaccagagggagaaatttctgcaacggctccaacaagtgcagcaacaaggg
catagtaatctacttagcgggccacatctctctggtgctagtcacaagcagtttaccaca
caacagcagaattcacttttacaacagtttagtcctcaaagcacttctgtttcaccccat
gttggcctagggcttggagttcagggagcagggcttgtgtctgttagttcggctgcacaa
cagcaaccaactcctgttcttcaaccgtcctcccaacatcccttggtttcaactgtaaca
aaagatggagattctgtacatgacaatccggaagaccagcagcaacataatatatctgaa
gatctgattgcagatcctgcctcaagtcctagtgtcaacaagatgatgagtgatgatgat
ttgaagacatcatatgtgggaacaagcactgtggcagtgtcagaagtgaatcaattatct
agggatactgatcttccacctggtcagccattgcaacccggtcaatcttctgctagcctt
ggtgtgattggtagaagaagtgggtcagaacttggtgccattggtgacaacattagtggt
gtagctgggaattctggtggaatgcacgatcagatctacaatctacagatgcttgaagct
gcatactacaaacttccacagcccagggactcagaacgtgcaaagaactatgttccgagg
catcctgtagtgactccatctagttatcctcaaactcaggcacccatagttgataatcct
gccttttgggaacgacttggtctggatccattgggcactgatgccttgttttttgcgttt
tactaccaacagagcacttatcagcagtacttagctgccagagaattgaaaaggcagtca
tggagatttcacaagaaatttaatacatggtttcaacggcatgaggagccaaaagtcact
aatgataactttgagagaggaaattatgtatactttgattttcatattgcaaacgatggt
tctcagcatggatggtgccagaggattaaaactgatttcacctttgaatatgatttcctc
gaggatgaacttgtggtataa
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