Musa acuminata (dessert banana): 135581527
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Entry
135581527 CDS
T03447
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135581527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135581527
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135581527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135581527
NCBI-ProteinID:
XP_064963142
LinkDB
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Position
BXJ2-4:47367150..47370386
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AA seq
498 aa
AA seq
DB search
MPSSRSSSSFDASSSQILESNPHLAASGNLQIGRRMEVDLGKLFIGGISWDTNEDSLRKY
FSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTEKHTIDGRMVEAKKAVPRDD
HQFLNKNSSSSIHGSPVPGHTKKIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQ
RPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVKRAVPKEPSPGPIMRSSIGGYNYGLN
RVNSFVNGYTQGYNASSVSGYGMRRLDDSRLGSLAGGRNGFASLSPGLGMGMDYEPPLSS
TFVGNPGYDNNLGYGRALNPYHNANSSRYTSLIPYNDVNGNTSSLFSLTSRNVWENVALN
HATKSTISNASMVSRSGSLGSLGTGNLNRGSGSSYTSGNLGFGGGGYIGLGRNSFDRRIA
PASPNTNLIASSSGYEGSYAKLYGATSVYGDPTWGSSSSEFDATGSFSIKLNNSNSDVTG
NGFADYMAGYNVNNNRES
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttctcgttcttcttcttcttttgatgcttcctcctcccagatcttagaatcc
aatccgcatctggcagcaagtggcaatctccagatcggaaggagaatggaggtggatttg
gggaagctcttcatcggcgggatctcgtgggacaccaatgaggatagcctccggaagtac
ttcagcgccttcggagaggtggtggaggcggtcatcatgaaggaccgtaccaccggccgc
gctcgcggcttcggattcgtcgtgttcgcggaccctgcggtcacggaaagagtcgtcacg
gagaagcacacgatcgatggtcggatggtggaggcgaagaaagctgttcccagggatgat
caccaattcctcaataaaaacagcagcagcagtatccatggatctcctgtccctggccac
acgaagaagatcttcgtgggaggcctatcgtcgactataacggagggcgattttaagaag
tactttgatcagtttggaaccatcacggatgtcgtcgtgatgtatgatcacaacacccaa
cggccgagggggttcggattcatcacttacgactcagaggatgctgtggacaaggtattg
ctcaatgcctttcacgagctgaatggtaagatggtagaggtgaagagggctgttcctaaa
gagccgtccccagggcctatcatgcgctcctcgattggtggatataactatggtttgaat
cgagtaaacagctttgtgaatgggtatactcagggatacaatgcaagctcggtaagtggg
tacggaatgaggaggttggatgatagtagattaggctccctggctggtggcagaaatgga
tttgcttcgcttagccctggccttggaatgggaatggattacgagccacctttgagctca
acttttgtaggaaacccaggctacgataataatctgggatacggacgggctttgaatcct
taccacaatgcaaattcaagtaggtacactagtctcattccgtataatgatgttaatgga
aatactagctcacttttcagtttgacatctcgcaatgtatgggaaaacgtggcccttaac
catgccacaaaatctacaatttcaaatgcatccatggtgtctaggagtgggagcctcggt
agccttggcaccggtaacttgaaccggggcagtggctcgagctataccagtggaaatctg
gggtttggaggtggcgggtatattggcttgggtcgcaacagttttgatagaagaatcgct
cctgcttcccctaacactaatcttattgcttcgtcttcgggatatgaaggaagctacgcc
aagttatatggtgctacttcggtttatggagacccgacttggggatcatcatcctcagaa
tttgatgccactggttcttttagtatcaagctcaataattcaaactcggatgtcacaggc
aacggctttgcagattatatggctggttataatgtcaacaataatagagagagctga
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