Musa acuminata (dessert banana): 135581582
Help
Entry
135581582 CDS
T03447
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135581582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135581582
03036 Chromosome and associated proteins [BR:
mus03036
]
135581582
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135581582
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135581582
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
135581582
Noncanonical PRC1 (PRC1.1)
135581582
Noncanonical PRC1 (PRC1.3/1.5)
135581582
Noncanonical PRC1 (PRC1.6)
135581582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-UDP
zf-RING_6
zf-rbx1
zf-Nse
zf-RING_10
ZNF512_C2HC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
135581582
NCBI-ProteinID:
XP_064971742
LinkDB
All DBs
Position
BXJ2-7:complement(260331..270745)
Genome browser
AA seq
530 aa
AA seq
DB search
MPAQKRPLPPPTPPPDHQLPPSDESPPADPPPPPSSLPTPAAQHEQEQGREEDGGDGGEG
DAEKEPPEVPQEQDADSDGRNAGGQSSDEEDEDDDEAVKLEFVPVKLADIRKEVQCPICL
GIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYP
DIDKYEEEELAFHEEDKFRNKKIQAYIAETFRRQSEALGRRRSTSKAATPFGRRSQGSYR
NHLRGRGRNIGRDMAVAGSDDDEEEEANGNDGTKDSSSADEPSPDRRPKRCKRWGAPRSS
PARTVGSVDVGSEENDDFEVNKEPLGTSPLRAGNRDMLAWGKNGTRSQTRHGNTSGANGR
LVKGGRMAKLVDYLRSLDDADDEFDVHLTLVPLDDGSMPNLEQPYLSCRPTLSIGHLCQF
IALQTSVQAEELEIYARKPRSGTLGGGSSSSMDDAPTVPCIGLQILEGHESLATLIASFT
SERGELSIMMLDIVRLLHLLLTHATLLHREDAPDDDREESSAQMLLRSTT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccaaaagcgcccgcttcctcctcctactcctccaccggatcaccaactcccc
ccctccgatgagtctccgcctgctgacccacccccgcctccctcgtctctgccgacaccg
gccgctcagcatgagcaggagcaggggcgggaggaggatggtggcgatggcggcgaaggg
gacgcggagaaagagccgccagaggtccctcaagaacaggatgcagattctgatggccga
aatgctggcggccaatcgtccgatgaagaagacgaggacgacgatgaagccgtgaaacta
gaatttgtccccgtgaagctggcggacattcgaaaagaagtgcaatgccctatatgcttg
gggataattcggaagacaaggacggtaatggaatgcctgcatcgcttttgccgggaatgt
attgacaaatcaatgagacttggaaataatgaatgtcctgcatgccgtactcattgtgcc
agtcggcgttctttgagagatgatcctaactatgatgctcttatagcagccctataccca
gatattgataaatacgaggaagaggaactggctttccatgaagaggacaaattccgcaat
aagaagatacaagcatacatagctgagacatttcgacgacaatcggaagctcttggtagg
agaaggtccacatctaaagctgctacaccatttggaagaagatcacaaggaagttaccga
aatcatctgcgtgggagaggtagaaatattggtcgtgacatggcagttgcaggctctgat
gatgatgaagaagaagaagcaaatggtaacgatggcactaaagattcctcttctgctgat
gagccctctcctgaccgaagaccaaagagatgcaagagatggggagcaccgcgatcttca
ccagctagaacagtgggcagtgttgatgttggatctgaggagaatgatgactttgaagtc
aacaaagagcctcttgggacatcacctctgcgagcaggaaacagagatatgcttgcttgg
ggtaagaatggcacgcgtagtcaaactagacatggtaatactagcggtgcaaatggaagg
ttggtcaaaggtgggcgcatggccaaattggtggactacctacgcagtttagatgatgct
gatgatgagtttgatgtacatttgaccctggttcctctggatgatggaagtatgccaaat
ttggaacaaccatatcttagctgccggccaaccttgtcaatcggacatctttgccaattt
attgctcttcagacatctgtacaagctgaagagttggagatatatgcaaggaagcctcgg
agtggcactctcgggggcgggtcttccagctcgatggatgatgcccctactgtaccttgc
ataggcctacagatactggagggacatgaatctcttgcaacacttattgcttctttcact
agtgaacgaggggagctgtcgataatgatgttggacattgtgaggttgctccatctcctc
ctgactcatgcaacattgttacacagggaggatgctcctgatgatgacagggaagaatcg
agtgctcaaatgctgctgcgttccacgacttaa
DBGET
integrated database retrieval system
