Musa acuminata (dessert banana): 135581999
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Entry
135581999 CDS
T03447
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135581999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135581999
03012 Translation factors [BR:
mus03012
]
135581999
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135581999
Translation factors [BR:
mus03012
]
Eukaryotic type
Release factors
135581999
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
135581999
NCBI-ProteinID:
XP_064990187
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All DBs
Position
BXJ2-11:4542857..4549408
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AA seq
492 aa
AA seq
DB search
MSKQHLYLCKLASSSPIPDASRGRNLRLRSVGAISYSRTSPSRSFAVGFPRLFRHKLAEM
AETDKNIEIWKVKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSR
VNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLY
LCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQ
SALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFD
QRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVF
GVEDTLKALEMGAVETLIVWENLDINRYVLKHSTSGETVIKHLRKDQETDQNNFLDSVTS
SELEVQEKISLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDLRAFD
ELSDEEYDEDSE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacagcatctatatctttgcaagcttgcttccagcagtccaataccagacgcc
tcaagaggaagaaaccttcggcttcggtctgttggggcgatctcgtattcccgcacgtcg
ccgtcgagatcatttgcagtaggttttcctagactattccggcacaagctagctgaaatg
gctgaaacggataagaacattgagatctggaaagtcaagaaattgatcaaggctctggaa
gcagctagaggtaatggcactagcatgatctctctaattatgccgcctcgtgatcaagtt
tctcgagtcactaagatgctgggtgatgaatatggaactgcatcaaatatcaaaagtaga
gtcaatcgacagtctgttctaggtgcgattacttccgctcagcagagactcaagctatac
aacaaggttcctccgaatggactagttttatacactggaactattgttactgaagatgga
aaagagaagaaagtcacaatagattttgagccattcaagcccatcaatgcatctctttac
ctctgtgataacaagtttcatacagaggcattaaatgaacttttggaatctgatgacaag
tttggtttcatagttatggatggcaatggtacactctttggcactttaagtggaaataca
cgtgaggttcttcacaagttcacagttgaccttccaaaaaagcatggtagaggtggtcaa
tcagcactacgatttgctcgccttaggatggagaagcgccataactatgtccgcaaaact
gctgagcttgcgactcaattttttatcaatcctgccacaagtcagcctaatgttgcagga
ttaattctggctgggtctgctgattttaagacagagttaagccaatctgatatgtttgat
caacggctacaggctaaaattctcaatgtggttgatgtgtcatatggaggcgagaatggt
ttcaaccaagccattgagctatcagctgagattctatcaaatgtcaagttcatacaggaa
aagaaattgataggcaagtactttgaggaaataagtcaagacacaggaaagtatgtgttt
ggtgttgaggacaccttgaaagctcttgagatgggtgccgttgagaccttgattgtgtgg
gaaaatttggatataaaccggtatgtcctgaagcatagcactagtggtgagactgtcata
aagcatttgcggaaggatcaggaaacagatcagaataattttttggattccgtaacctcc
tcagagctggaagtacaggagaaaatttccctgctggagtggtttgcaaatgaatacaag
cgctttggatgtactcttgaatttgttactaacaaatctcaggagggatctcagttttgc
agaggcttcggtggcattgggggaatccttcgttatcagcttgacttgagggccttcgat
gagctttccgacgaggaatatgatgaagattccgaatag
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