Musa acuminata (dessert banana): 135582004
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Entry
135582004 CDS
T03447
Name
(RefSeq) protein SPA1-RELATED 4-like isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
135582004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135582004
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
135582004
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Pkinase
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
135582004
NCBI-ProteinID:
XP_064976023
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Position
BXJ2-8:3888157..3900697
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AA seq
1072 aa
AA seq
DB search
MEGNETTDTEISKEAALLKTENDRSPREPVTGSAVETYSLLASQDSDWPEHLSLLRSPEV
VIESVAGRNFDYNVGTQAGSQPLCASLHSLNNPAISVEELTLKNYKNPYLSLDGSSSLSL
GGSSSSGEKPLVQTSSWPNFTRIAGRPKQTAPKDYQLLGRKDAGGSALPPYGSQTLLPLL
QSQPKTSRVDEHVAGVGNHRVSSNLSARSPHEIRPKSLSSSGFQQFFIRSSSNGKAVACK
HQKGHDVLDTAISALTIEKSNVDKRISSNLSHALGEKADRMHLLGGGELVSHHGDITLRE
WLKPKRQRISKAQRMHIFKQILGLVDACHTKGLALQHLRPSYFLVLPVDQIKYIGSFIPR
EQVELAPNIHHEQHPLKKKRHREPDEAVDEFLKLKHQKLADDGSVTYLCKIGCIGNDQGE
ENEVDASKAGNSRCDFRKLTEGKPFKAYGTSHPPSSDAIRQHPMCESVLLEEGWYVSPEE
LNGQVASCSTNIYSLGVLFFELFCCSETWEVHCTAMSDLRHRILPPSFLSESPKESGFCL
WLLHPEPYSRPKSRDIILSDLVSEGRNLSAIDHTSASTEEEDAETDLLLHFLLSLKEHKE
KQAADLVAGFECIRMDFEEVKRRHLARSELVLSGKVPSSKFGDISEFHSLEKPVTHVETM
TRLSMSNLLDERLNKNINQLENAYFTMRSKIEIPKDNSVTRSDTDLLKMRDRSFQVQNAD
AEMEVDHLGIFFEGLCKFARYSKFEVCGGLKNDDILNCANVICSLSFDGDEDYFAAAGVS
KKIKIFEFSSLLNDTVDIHYPLIEMSSRSRLSCVCWNSYIKNYLASTDYEGVVQLWDAST
GQGFTQFRGHQKRAWSVNFSQVDPAKLASGSDDFSVKLWSTNEKNCIDTIRNTANVCCVQ
FSPYSSHLLSFGTADYRIHCYDLRNTRIPWCTLGGHGKAVSYVKFLDAETLVSASTDNTL
KIWDLKRTSGSGSSCNSCSLTLQGHTNEKNFVGLSVYDGYIACGSETNEVYAYYRTFPMP
MTCHKFGSIDPITAQETSNDGGQFVSSVCWRGKSNMVVAANSTGSIKVMQLV
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaatgaaaccactgacacagagatctcaaaagaagctgctctcttaaaaaca
gagaatgatcgatcaccacgggaaccagtcaccggcagtgcagtggagacatacagtctg
ttagcttcccaggacagtgattggccggaacacttatctttgctgcgatcacctgaggtg
gttattgaatctgttgctggaaggaacttcgattacaatgtaggtacacaggcaggttct
caaccactttgtgcaagccttcactctttgaacaacccggcaatatccgtggaagagctg
actctgaaaaactacaagaatccttacttatcactggatggtagctcaagtttatcttta
ggtggcagctcgagtagtggagaaaaacctttggtccagacaagttcatggccgaatttt
acaaggattgctggcagaccaaagcaaacagcaccaaaggattatcaattattgggtcgc
aaggatgctggaggcagtgcactgcctccatatgggtctcagacattgcttccactcctg
caatcgcaaccaaagacatccagggtagatgagcatgtagctggagttggcaaccacaga
gtctcaagtaatttaagtgcaagatctcctcatgagatccgacctaagtctctgtcttct
tctgggtttcaacaattttttatcagaagttcctcaaatggtaaagctgttgcatgtaaa
catcaaaaaggtcatgatgtattggacactgcaatatctgctctaactattgaaaagtct
aatgttgacaaaagaatttcttctaatttgtctcatgcgctcggtgaaaaggcggatagg
atgcaccttttaggtggtggagaactggtctcccatcacggggatattactttgagggag
tggcttaagcctaaacggcaaaggataagtaaggctcagaggatgcatatatttaagcag
attctgggtcttgttgatgcttgtcacacgaaagggcttgctttgcagcatttacgacca
tcatattttcttgtgctacccgtagatcagattaaatacattggatcttttatccctcga
gaacaggttgagctagctccgaatattcaccatgagcagcatccattgaaaaagaagagg
catagggaaccagatgaagcagttgatgaattcttgaaactaaagcatcagaagcttgct
gacgatggtagtgtcacatatctttgcaagattggctgtataggaaatgatcaaggtgaa
gaaaatgaagttgatgcttccaaagcaggaaactccagatgtgattttaggaaacttaca
gagggtaaaccgttcaaagcttatggtacatctcaccccccaagttctgatgccattcgc
caacatcctatgtgtgaatcagtactgttggaggaggggtggtatgttagtcctgaggag
ttgaatggtcaagttgcctcttgctcgacaaatatctatagtcttggggttctatttttt
gagctcttttgctgttctgaaacatgggaagtacattgtactgcaatgtcagatcttcgg
catcggattcttcctccaagttttctatcagaaagtcctaaggaatctggtttctgtctt
tggttgttgcatccagagccttattctcggccaaagtcaagggatattattctgagtgac
ctagtaagtgaaggtagaaatttgtcggcaatagatcatacatctgcatcaaccgaagaa
gaagatgctgaaactgacttgttgttgcattttctattatctttgaaagagcataaggag
aagcaagcagcagatctagtagcaggctttgaatgcataagaatggatttcgaggaggtt
aaaagaaggcacttagcaagatctgagttagttttgagtggcaaagttccgtcatcaaag
tttggcgatatctcagagtttcactctcttgagaaacctgtgacacatgtggaaacaatg
accagattatccatgtcaaatttacttgatgagagattaaataaaaacattaaccaactt
gaaaatgcatacttcaccatgagatccaaaattgagatacccaaagacaattctgtaact
cgttccgacactgatcttcttaagatgcgagataggagttttcaagtccagaatgctgat
gctgaaatggaagtggatcatcttggaattttttttgaaggtttatgcaagttcgctcgt
tatagtaagtttgaagtatgtggtggtcttaagaatgatgatatccttaactgtgcaaat
gttatttgctctttgagctttgatggtgatgaagactactttgctgctgctggggtatca
aagaaaataaagatatttgagtttagctctcttttgaatgacactgttgatattcattac
ccactgattgaaatgtcaagtagatccaggctcagttgtgtatgttggaatagctatata
aaaaactacctggcatcaacagactatgaaggtgttgttcagttatgggatgcaagcact
ggtcaaggattcacacagttcagaggacatcaaaaaagggcttggtcagtcaatttctct
caagtggatccagctaagctggccagtggaagtgatgacttttctgtgaagctgtggagc
actaatgagaagaattgcattgataccatcaggaatacggccaatgtatgctgtgtccag
ttctctccatactcctcccatctgttgtcttttggaaccgccgattacagaatccactgt
tatgatctgagaaatactagaattccttggtgtactcttggtggacatggaaaggctgtc
agctatgtgaaattcttggatgcagaaactcttgtatctgcgtcaactgacaacaccctt
aagatttgggatcttaagagaacaagtggaagtggttcatcttgcaattcttgcagtctg
accttacaaggtcatacaaatgagaagaattttgttggtttatctgtttacgatggatac
atagcctgtggttctgaaacaaatgaagtatatgcttactatagaacttttcctatgcca
atgacctgtcacaaatttggttccattgacccaatcacagcacaagagacaagtaatgat
ggtggacagtttgtgtcaagcgtttgctggagagggaagtcaaatatggttgttgctgca
aactccactggaagcattaaagtgatgcagctggtttga
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integrated database retrieval system
