Musa acuminata (dessert banana): 135582019
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Entry
135582019 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135582019 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135582019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135582019
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135582019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Zn_ribbon_RanBP
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
135582019
NCBI-ProteinID:
XP_064959035
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Position
BXJ2-4:complement(4122803..4133169)
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AA seq
693 aa
AA seq
DB search
MPGSEDGRTVMKADEESTSKLDKSSSKTGAWQCSICTYENDQYLVSCDVCGVFRDFPGKS
GSRDEENVNGTSKKSEVSPLGRSLFDRPPNSMPKVAGGFLCNEAGKSCGARLISAQLGDL
HKMFLAPSLSQTKNIEPFRFDAPSPDDIVSSGKSSRTFPKVNTMPSTSVKISHDKPGKKG
LVEVLQDNEVPESFPPSSLPNNHNEFENDNPSSFEDEPHMLANNVQSLKLEKHSPKSRNV
KAKSNAEYKPEEWMFPDKEGTLSQLNLAIVGHVDSGKSTLSGRLLHLLGQISNKQMHRYE
REAKQKGKGSFAYAWALDESVEERERGITMTVAVAYFLTKKYRVVLLDSPGHRDFVPNMI
SGSTQADAAVLVIDASVGAFEAGMGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDQVDFS
KDRFDYIKLQLGHFLRTCGFKESLVTWIPLSALDNQNLLTTASDIHLSCWYQGYCLLDAI
DSLQSPHRDVLKPFLLPICDVISKYSSGQVTACGKIETGAIRIGSKVLVMPSGDPAVVRN
IERDSSTCNVARAGDNVVASLHGVDQGQVIQGGVLCHPDFPVTIASSLELKILILDIATP
IIIGSQVELHIHHAKQAAKVVKVLSLIDPKTGSAAKKSPRMLVARQRAIVEVALEGEICV
EEFSNCRALGRVFLRALGSTIAVGIVTRILQEA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccagggtcggaggacggccgaacagtcatgaaggccgacgaagaaagcacatcgaag
ctggataagtcatcaagcaaaactggggcttggcagtgtagcatctgcacatacgagaat
gatcaatatttagtatcttgtgatgtatgtggagtttttcgggatttccctggaaaatct
ggcagtagagatgaagagaatgttaatggcacaagcaagaaatctgaagtatctccactg
ggcagatcactttttgatcgaccacctaatagcatgcctaaggtagctggtggctttctt
tgcaatgaagctggcaaatcgtgtggggcaagactcatttctgctcaactcggtgatctc
cataaaatgtttctggctccatctctcagtcaaaccaagaatatagaacctttcaggttt
gatgcaccatctccggatgatatagtttcttctgggaagagctcaagaacttttcccaag
gttaacactatgccttcaacatctgttaagatttcacatgataagcctgggaaaaagggc
cttgtagaggttctacaagataatgaagttccggagagttttcctccctcatctttgccc
aataatcataatgagtttgaaaacgacaatcccagcagctttgaagatgaaccacatatg
ttagctaacaatgtacaaagcctgaagttggagaagcactctccaaagagtaggaatgta
aaagcaaaatcaaatgctgagtacaaaccagaggagtggatgtttcctgataaagaagga
accctaagccagttaaatcttgcaattgttggtcatgttgattcagggaaatccacgttg
tctgggaggttgctacatcttttggggcaaatttctaataaacaaatgcatagatatgag
agagaagcaaagcaaaaggggaaaggatcatttgcttatgcatgggcattggatgagagc
gttgaggagagggagaggggcataacaatgacggtggctgttgcatacttcttaacaaaa
aaatatcgtgttgttttacttgactcaccaggtcacagagattttgttccaaacatgata
tctggttcaacacaggcagatgcggctgttttggttatagatgcctctgtaggtgctttt
gaagcaggtatgggtggtaaaagtgttggacagacgaaggaacatgcacaacttattagg
agctttggtgttgaacaacttattgtcgctgttaacaagatggatcaagtggacttctcc
aaagatcggtttgattatattaaattgcaactaggacatttcttacgcacctgtggattc
aaggaatcacttgtgacatggattcccctgagtgccttggacaatcaaaatttgcttaca
actgcttctgacattcacttatcttgttggtatcaaggatattgtcttttggatgccatt
gactctttacaatctcctcaccgggatgttttgaagccatttcttctgcctatatgtgat
gttatttctaaatattcatcaggacaagtgacagcttgtggaaagatagaaactggagct
attcgaattggttctaaggttctagttatgccatcaggagatccagctgtagtacgaaac
atagaaagggattcttctacttgcaatgttgcaagagctggtgacaatgtggtcgccagt
ttgcatggtgttgatcaaggtcaagtgattcaaggtggagtactatgccacccagatttc
cctgttaccattgcatcgagtttagaattgaagattctcatcctcgacattgcaacacca
attatcattggatctcaggttgagctccatatacatcacgcaaagcaggctgcaaaggtg
gtaaaagtattgtccttgatagatccgaaaacaggaagtgccgctaagaagtcaccacgt
atgcttgtagccagacaaagagctattgtagaggtggcactagaaggagagatatgtgta
gaagaattctcaaattgtcgggctcttggaagggtcttcctacgagctttaggaagtacg
attgctgttggcattgtgactcgcattctccaagaagcatga
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