Musa acuminata (dessert banana): 135582040
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Entry
135582040 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135582040 isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
135582040
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
90S particles
Other 90S particles
135582040
Pre-60S particles
Other pre-60S particles
135582040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
135582040
NCBI-ProteinID:
XP_064990212
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All DBs
Position
BXJ2-11:complement(4816386..4848567)
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AA seq
1155 aa
AA seq
DB search
MKRKDAAELPLPPGDGDDEGEEEEISQPVLNLGRGSDVCKALMDRYAKSSAPQHRHLCAS
AAAMRSILQEEGLPLTPPGYFAAVITAIRDADTADHDAISALSAFLSILLPVVPARSLPP
TMVKNAALVLATFLWDPPSKLPTGAVRSMVKSLGGLVLRLELEDWDEVKLPVEVLLAFTV
DKRPKVRRCAQLYVKKVFETLKSSSIIKKASKVVFSLYKKYISLLEEFCTPELLNAPASN
ELHKTEHLEIIHMLIVLKLIAPNLSEKVRMKIISDVYRFLRSATSLLTGHIVRVVDALME
QTEAKILIAESDDIISALTSYISSSEKNTLDTTVFGLKALSNLLNKLRDVQPTIWIGSFP
VIFVSVKGYLVADGNPSEAVAEVLKDLINVHIDLKLSMTGASKLCNNDEDDNPETSAIVN
LCSVFNNMLNTCKSPTEPMLDVISALFLRLGKTSYLFMKDILLKLAQCVITVEGDLSVMK
HLQKCIGSAVIAMGLENVLSLVPISFNRDKKTCSNAWLIPILKRYASGASLCYFMDHIVP
LAKSILKVCNKVKRATLQEKLRSYAHELWDLLPAFCRCPPDTSQSFDSLAKLLVHTLKDD
SSLHETISISLQILVSENMRVLGANQEVNQHASLKDIHDKAESFPIGYTKKTASKNLKIL
ASNSMDLIETMADVFLDSPPEKHAVLKEAIESLASLVKSEDLHRFFLSLLEKFDLLNFLT
ESNKLNEGDMIDVDKETESEETSKMDKNQEKRCLVIDLASSFVETADENLVNTMFDFINT
SLLDTDNTSKAEELSTLRKILEKHSWFCSVRIDDLIYLLQGVKSHDDNMIEKLRLSCYHF
LLVHVIKINEEKTNTKAFLILNEIILKLKSKKESRKLAYDTLLATSCSLKNSQFDNAQSD
VQRLFVMVMGYLSSSSPHIMSGAISALSLLIYNDAEFCLAVPNLIPSVLVLLQNKSNEVI
KAALGFVKVLVSSLHSNNLIILVPDILNGILPWSSISKHHFRLKVAIILEILIRKCDYEA
IDGNVPKKYKDFVNSVVESRQRKKKSECPANPDAPCDSKDPVTKRGKKRILDDVPQKKDS
GLRSGVIRGRGKKQKSDAYSMNGAAATVDKGRRHQSINRTASIANKRIKKNNANQKPKQV
ERLKFKRKRRNKEEQ
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggaaggatgcggcggaactcccgcttccgcccggcgacggcgatgacgaaggt
gaagaagaggagatatcccagcccgtcctcaatctcggccgaggctccgacgtgtgcaag
gctctcatggaccgctacgccaagtcctccgccccgcagcaccgtcacctttgcgcgtcc
gccgccgccatgcgttccattctccaggaggaaggccttcccctcacacctcctggctac
ttcgcggctgtcatcaccgccatccgcgacgccgacaccgccgaccatgacgctatttct
gccctctctgccttcctttctatccttctaccggtcgtccctgcccggtccctgcctccg
acaatggtaaaaaacgcggccctcgttcttgccactttcttgtgggacccgcccagtaag
ctgcctactggggcagtacggtccatggttaagtcgcttggtggcttggtgctccgtctt
gaattggaggactgggacgaggtcaaattgcctgtggaagtccttctggcgttcaccgtg
gacaaacgcccaaaggtgaggagatgtgcccaactatatgtcaagaaggtttttgaaact
ttgaagagctccagcatcatcaagaaggcgagcaaagttgtgttttctttatacaaaaag
tacatatctttgttggaagaattctgcactcctgaactgttaaatgcacctgcttcgaat
gaattgcacaagaccgaacatttggaaatcatccatatgcttatcgttttgaaacttatt
gcaccaaacctctctgagaaagtaagaatgaagatcatttctgatgtttataggttcttg
aggagtgctacctccttgcttacaggacacattgttagagttgttgatgcattaatggaa
caaacagaagctaagattcttattgctgagtcagacgacatcatatctgctcttacatca
tatatatcttcgagtgagaagaatactcttgacaccaccgtttttggattaaaggctttg
agtaatttgttgaacaagcttcgtgatgttcaacccaccatatggataggcagctttcct
gtgatcttcgtctcagttaaaggatatctggttgctgatggtaatccctccgaagctgtt
gcagaagtcttgaaagacttgattaatgttcatattgacctgaagctttctatgactggt
gcaagcaagttatgcaataatgatgaagatgataaccctgagacaagtgcaattgtaaat
ctctgttctgtattcaacaatatgctcaacacttgcaaatcccctactgaacctatgttg
gatgtcatttcagctttattcctcaggcttggcaagacctcgtacctatttatgaaggac
atattacttaaactggcacaatgtgtgataacagtggaaggagacttgtctgtcatgaaa
catcttcagaaatgtattggatctgctgtaatcgctatgggactagagaatgtgctttcg
ttggttcctatatctttcaatagagacaaaaaaacttgctcaaatgcttggttgataccc
atattaaagagatatgcttctggggcatccttatgttacttcatggaccatattgtgccc
cttgctaaatctattctgaaagtctgtaacaaagtgaaaagagcgacgttgcaagaaaaa
ctcagatcttatgcccatgaattgtgggatttgcttcctgctttttgtcgttgtcctcct
gatacttctcaaagttttgattctcttgccaagctgctggtacatactctcaaggatgat
tcttccttgcatgaaaccatatccataagcttgcagatacttgtgagtgaaaacatgaga
gttcttggggcaaaccaagaagtaaaccagcatgcctcattaaaagatattcatgataag
gccgaaagttttcctattgggtacacgaagaaaactgcatcaaagaacctaaagatctta
gcttccaattctatggatttgattgagactatggcagatgtcttccttgattctcctcct
gaaaagcatgctgtcctgaaggaagcaattgaatctttggcttcactagttaagagtgaa
gatcttcataggttttttctatcattgttggaaaagtttgatctactaaattttctaact
gaatctaataaacttaatgagggtgacatgatagatgtcgacaaagagactgagagtgag
gaaacaagcaaaatggataaaaaccaagagaaaaggtgtttggttattgatcttgcttcc
tcatttgttgaaactgctgatgagaacctggttaatacaatgtttgattttattaacacc
tctttgttggatactgataatacaagcaaagcagaggaattgtctactttaagaaaaatt
cttgagaagcatagttggttttgttctgtccggattgatgatttgatttatcttctgcaa
ggtgtgaaaagtcatgatgataacatgattgaaaaacttcggctatcatgttaccatttt
ctattggttcacgttataaaaatcaacgaggagaaaacgaatacaaaggcgtttttaatc
ttgaatgagatcatactgaaacttaagtctaagaaagaatccagaaaattggcatatgat
acattgttggcaacaagttgtagcctgaagaattcccaatttgacaatgcacaatcagat
gttcaacgactatttgtcatggtaatgggctatctttctagttcatctcctcatatcatg
agtggtgcaatttctgccctttcattgcttatatacaacgatgctgagttttgtctggct
gtgccaaacctgataccttctgtcttagttttgctacaaaataagtctaacgaagttatt
aaagcagctctgggcttcgttaaagtgttggtttcatcgttgcactcaaacaacctaatt
attctagtacctgatattctgaatggaatattgccatggtcatcaatttcaaaacatcat
ttccgattgaaggttgcaattatcctcgaaattcttataaggaagtgtgattatgaggcc
attgacggcaatgtgcccaaaaaatataaggactttgtcaattccgttgtggagagccgt
cagagaaagaaaaaatctgaatgtcctgccaatcctgatgctccatgtgattcaaaagat
cctgtcacaaaaagagggaagaaaaggattcttgacgatgtaccacagaagaaggattca
gggctaagatctggtgtcataagagggaggggaaagaaacagaagagtgatgcttacagc
atgaatggggctgctgcgaccgtagataaaggcagacgccaccaatcgatcaaccgcaca
gcaagcatcgcaaataagaggatcaagaagaataatgccaatcagaaacccaagcaagtc
gagagactgaagttcaaaagaaaaaggagaaacaaggaagaacagtaa
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