Musa acuminata (dessert banana): 135582078
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Entry
135582078 CDS
T03447
Name
(RefSeq) phytochrome A-like isoform X1
KO
K12120
phytochrome A
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
135582078
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Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
135582078
NCBI-ProteinID:
XP_064976069
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Position
BXJ2-8:complement(4152580..4159344)
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AA seq
1129 aa
AA seq
DB search
MSSSRPTQSSTSSSRSRHSARIVAQTTVDAKLDADFEEFGESFDYLQSVYALREPSGDQR
RSEKVTAYLQHIQKGKFIQSFGCLLALDEKSFKVIAYSENAPEMLTMVSHAVPSVGDHPV
LGIGTDVRSLFTSPSTAALQKALGFAEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIVDF
EPVKPSEVPMTAAGALQSYKLAAKAIAKLQSLPGGSIQRLCNTVIDEVFELTGYDRVMVY
KFHEDDHGEVFAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSIKIYQ
HDKLPFDITFCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEDDDTEAGQQPQRQK
RKRLWGLVVCHNETPRFVPFPLRYACEFLMQVFAIHVSKEIELENQIREKNILRTQTLLC
DMLLKETSPIGIVTQSPNIMDLVKCGGAALLYQNKVWRLGLAPTEPQIRDIAYWLTEYHM
DSTGLSTDSLMDAGYPGASALGDSVCGMAAARITSRDVLFWFRSHTADEVRWGGAKHDPS
DKDDGSRMHPRSSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGSLNENDSASKKDTLD
SRINDLKLEGLVELQAVTNEMVRLIETATVPILAVDVDGIINGWNLKIAELTGLSVDQAI
GKHLLSLVEECSADAVREMLHLALQGKEEQNVQFQMKTYGPRSDDGPVILIVNACASRDI
NDHVVGVCFVAQDMTGHKMVLDKFTRIEGDYKAIVHNPSPLIPPIFGADEFGWCSEWNAA
MTKLSGWQRDEVIDKMLLGEVFGSHVACCRMKNQDTYVILSILVNNAMTGQETEKAPFSF
INRNGKLVECLLSVSKKVGEDGMVTGVFCFLHTASHELQHVLQVKQISEQSVMKRLKALG
YIRHEIRNPLSGIMYSRKMLEGTDLCDEQRQLLNTGAKCHRQLNRILDDLDLENIMDSWL
DLEMVEFVLHDLVVTAVSQVMLASQSKGVRIVYDLSDGFMNEGVFGDSLRLQQILAGFLL
VSVKSSPSGGLVEIAASLIKDQLGKSLHVLHLELRITHTGSGVPDDLLSEMFGTSEDPSE
EGLGLLVCRKLLRLMNGDVRYLREAGKSGFIVSVELASAPKSRGTRTLV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtccaggcccacgcagtcttccaccagctccagtagaagccggcacagcgcc
cggatagtggctcagacaaccgtggacgccaagcttgatgccgacttcgaggagttcggc
gagtccttcgactacttgcaatcggtttacgcgctccgggagccctccggggaccagagg
aggtcggagaaggtcacggcctacctgcagcacatccagaaggggaagttcatccagtcc
ttcggctgcttgttagccctcgacgagaagtcgttcaaagtcatcgcctacagcgagaac
gccccggagatgctcaccatggtgagccatgcggttcccagcgtgggcgaccaccctgtg
ctcggaatcggcaccgacgtcaggtctctcttcacttctcctagcacggcggcgctgcag
aaggctcttggcttcgccgaggtgtctctgctcaatcccatcctagtccactgcaagacc
tccggtaagcccttctatgcgattgtgcaccgtgtgactggttgtttgatcgtagacttc
gaacccgtgaaacctagtgaggtgcccatgactgccgctggtgctctgcagtcttacaag
ctcgctgccaaggctatagctaagcttcaatccctgcctggtggcagcattcagcggctg
tgtaatacagtgatagatgaagtctttgagctcactggctacgacagggtcatggtttac
aagttccatgaggatgatcatggtgaggtgttcgcagagatcacaaagccaggcctggat
ccttatctggggctacattatccggcgacagacattccccaggctgccaggttcctcttt
atgaaaaacaaggttcgaatgatctgtgattgtcgtgccaagtccatcaagatataccaa
cacgacaagcttccctttgacatcaccttctgtggatctaccctccgagcaccacatagt
tgtcacttgcagtatatggagaacatgaattcgattgcttcactagttatggctgtggtg
gtaaatgaaggtgacgaggatgatgacacagaggcagggcaacaaccacagcggcagaag
aggaagaggctttgggggcttgtcgtatgccacaacgagaccccaaggtttgtccctttc
cccttaagatatgcatgtgagttcttaatgcaagtgtttgcgatacatgtcagcaaggag
attgaattagagaaccagatacgtgagaagaacatcttgcggacccaaactctcctgtgt
gatatgctgctcaaagaaacttctcctataggcattgtaactcagagtcccaatatcatg
gatctagtaaaatgtggtggtgctgcacttctttaccagaacaaggtgtggcgactcggt
ttagctccaactgagccacagatacgggacattgcctactggctgacagagtatcacatg
gattcgacaggcttaagtactgatagtctaatggatgctggatatccaggtgcgtcagct
cttggcgattcagtttgtggaatggctgctgccagaataacgtccagggatgtcctcttt
tggttcagatctcatactgctgatgaagttagatggggaggtgcaaagcatgatccttca
gacaaggatgacggtagcagaatgcacccaagatcttcattcaaggctttccttgaagtc
gtgaagatgaaaagcttgccttggaatgactatgagatggatgccattcactcgctacaa
cttatactaaggggatccctgaatgaaaatgacagtgcgagcaaaaaggacacattggac
tccaggatcaatgaccttaaacttgaagggttggtagaactgcaggcggtaacaaatgaa
atggtccgcctaatagagacggcgactgtgccaattttagctgtggatgttgatggcatc
ataaatggatggaatcttaaaattgctgaattgactggtctatcagttgaccaagcaata
gggaaacatttgcttagcctcgtggaagaatgttcagcagatgctgtcagggagatgctt
cacttggcattacagggaaaagaggagcaaaatgtgcagtttcaaatgaaaacttatggt
cctcggagtgatgatggtcctgtcatattgatcgttaatgcttgtgcaagtcgtgacatc
aatgatcatgtagttggtgtttgttttgtggctcaagatatgactggtcataagatggtg
ttggacaaatttacccggattgaaggagactataaagccattgtccataaccccagtccg
cttatacctccaatatttggtgcagatgaatttggatggtgttcggagtggaatgcagct
atgactaagttatctgggtggcagagagatgaggtgatagacaagatgcttttgggggag
gttttcgggagtcatgtagcctgctgccgcatgaagaaccaagacacatatgtaattctc
agcatcttagttaacaatgcaatgacagggcaagaaactgagaaggctccttttagtttt
atcaatcggaatggtaaacttgtggagtgcctattgtcagtaagcaagaaagtgggcgag
gatggtatggtcacaggagtcttttgctttcttcatactgctagtcatgagctgcaacat
gtgctccaggtgaagcaaatctctgagcagagtgtgatgaagaggttgaaggctttgggt
tatataaggcatgaaattaggaatcccctttcaggtataatgtattcaagaaagatgctg
gaaggaactgacttgtgtgatgaacagagacagctccttaatactggggcaaaatgtcat
cgccagttaaataggattcttgatgacttggatttagagaacattatggacagctggtta
gatctggaaatggtcgagtttgtgctgcatgatttggtggttactgcagtaagtcaagtc
atgcttgccagccagtcaaagggagtcagaatagtctatgatctgtctgatgggttcatg
aatgaaggtgtttttggtgacagtcttaggcttcaacagatccttgctggtttcttgctt
gtgtctgtgaaatcctctccttctggaggtctggttgaaattgctgctagccttatcaag
gatcagctgggaaaatctctccatgtattacaccttgaactgaggatcacacataccggc
agcggagtgccagatgatcttctttctgaaatgtttggaaccagcgaggatccatccgag
gagggcctcggccttcttgtgtgcaggaaattgctcaggctcatgaacggcgatgtgcgc
tatctcagggaagctggcaagtcaggattcatagtctccgtggagcttgcttctgccccg
aagtcgaggggcacaaggactttggtttga
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