Musa acuminata (dessert banana): 135582213
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Entry
135582213 CDS
T03447
Name
(RefSeq) oligoribonuclease-like isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135582213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135582213
03009 Ribosome biogenesis [BR:
mus03009
]
135582213
Messenger RNA biogenesis [BR:
mus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
135582213
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
RNases
135582213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
135582213
NCBI-ProteinID:
XP_064951790
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Position
BXJ2-2:24775104..24784104
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AA seq
279 aa
AA seq
DB search
MNPSTKEDEARRRGKQLLSAGEGYKMNSISNLFSILHLDAEDDKEQIASLSVAKDETHAK
KSDVTKGKGQTSGKNKSSKDDRLQQQTLPSSSGDYKMPLVWIDLEMTGLSIEVDRILEIA
CVITDGNLTKSVDGPDLVIKQTKECLDNMGEWCREHHGASGLTERVLRSTITEVDAEKQV
IDFVKKHVGGHTPQLAGNSVYVDFLFLKKYMPSLAVIFPHTLVDVSSVMALCIRWFPKEK
RRAPAKEKRHRAMDDIKESIRELKYYKEAIFKAPNRARQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctccaccaaggaagacgaggcgagacgccgagggaagcagctattgagcgcc
ggagaaggttataagatgaacagtatttcaaatctattctctattcttcatttggatgct
gaggatgacaaagaacaaatagcctctctttctgttgccaaggatgaaacccatgccaaa
aagtcagatgtaactaagggaaaaggccaaacatcaggaaaaaataaaagttcaaaagat
gatagattgcaacaacaaacccttccatcatcatcgggtgactacaaaatgccccttgtg
tggattgacttggaaatgacaggtttgagtattgaagttgatcggatattggagattgct
tgtgtcataacagatggtaatttaaccaaatcagttgatggtccagatttggttatcaaa
caaacaaaggagtgcttggataatatgggggaatggtgtcgtgaacatcatggagctagt
ggtttgacagagagagttctacgaagcacaataacagaggtggatgcagaaaaacaggtt
atagactttgtgaagaagcatgtaggtggacataccccacaattggctggaaattctgtt
tatgtggattttctgttcttgaagaaatatatgccttctctggctgttatatttcctcac
acactagttgatgttagtagtgttatggctttgtgcatccgttggtttccaaaagagaag
aggagggcacctgcaaaggagaaaaggcatagagctatggatgacataaaggagagcata
agggaactaaaatactacaaggaagccattttcaaagcaccaaacagggccagacagtaa
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