Musa acuminata (dessert banana): 135582929
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Entry
135582929 CDS
T03447
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135582929
Transcription machinery [BR:
mus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
135582929
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
HTH_WhiA
HTH_28
Lac_bphage_repr
Motif
Other DBs
NCBI-GeneID:
135582929
NCBI-ProteinID:
XP_064973517
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All DBs
Position
BXJ2-7:22486799..22494233
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AA seq
498 aa
AA seq
DB search
MMATAAVIGLHTGKRLLSSSFCQTDLTEKLFSVPDHGSLPFSGGSTKCTIVAKKSSHFGS
NVPPTRHIPTIKALRERVNTSAPSTSDTWSERPDLESSLEVLILLQKSMLEKQWELPFTQ
MTTVVAPENSCQLPEITRSGISARERRTISSRKCFSHKANLVPSSRVKQLHPSVSRELLK
SDISGYVRGTVSENLLTHAEVANLSKTIKAGIHIQEQRAKLQDKLGFEPTDRQLASSLRM
SRAELHTKMIESSLAREKLAMSNVRLVMSIAQKYDNLGAEMTDLIQAGLIGLLRGIEKFD
SSKGFRISTYVYWWIRQGVSRALFKNSRTLRLPTHLHERLSSIRHAKIRLEEKGITPSID
KLAETLNMSQKKIRDATQAASKVLSLDREAFPSLNGLPGETLHSYIADRNVENNPWYGFE
EWSLKDEVKKLLYTTLSKREREIIRLYHGIDSECHTWEDIGKRFGLSRERVRQVGLIAME
KLKHVARRRKLEAVLVKH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatggctacagcagcagttattggattacacacaggaaagaggcttctgagctcttca
ttctgtcaaaccgacctcactgagaagttattctctgttccagatcatggttcactgcca
ttttcgggtggctccactaaatgcaccatagttgcaaagaagtcttctcattttgggtca
aatgttccaccaaccaggcacataccgactatcaaggcactgagagaacgtgtcaatact
tcagctccttcaactagcgatacatggtctgagaggcctgatcttgaatcttctctagag
gtcctcattttgctacagaagtctatgttggaaaagcaatgggaacttcctttcacacag
atgacaactgttgttgctcctgagaatagctgccagttgccagaaattactcgttcaggg
atatctgcccgtgagaggagaactatttccagtaggaaatgttttagtcataaggctaat
ttggtgccatcaagcagagtgaaacagcttcatccaagtgttagtcgcgagttacttaaa
tctgacattagtggttatgtgcggggcaccgtgagtgaaaacttgctgacacatgcagaa
gtcgcaaatctgtcaaagacaataaaagctggtatacatatacaagaacagagggcaaaa
ctgcaggataaattgggatttgaaccaactgacagacagctggcttcttcattgaggatg
tcacgtgctgagttgcacacaaaaatgatcgaatcttctttggcaagggagaagcttgca
atgagcaatgttcgtctagtcatgtctattgcacagaagtatgataacttgggagcagaa
atgactgaccttatccaggctggtttgattgggctacttcgtgggatagaaaagtttgat
tcttccaagggcttcagaatttctacttatgtatattggtggatacgacagggtgtctcg
cgagcattgtttaagaactccaggacattaagactgcctactcatttgcatgaaagatta
agttcaattagacatgcaaagattagattggaggagaaaggaattacaccatcaattgac
aaacttgcagagaccctaaatatgtcgcagaaaaaaataagggatgccacacaggcagcg
agcaaagtactttctcttgatagggaagcctttccctcattaaatggccttcctggcgag
actcttcacagttatattgcagacagaaacgttgaaaataatccatggtatggttttgag
gaatggtctctcaaggatgaagtaaagaagcttttatatacaacacttagcaagcgggag
agagagattattagactttatcatggtattgacagtgagtgtcatacatgggaggatatc
ggcaaacggtttggtttgtcgagagaacgcgttagacaagtggggctcatcgccatggag
aagctcaagcatgtggcaagaagaagaaaattggaggcagtgttggtaaagcattaa
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