Musa acuminata (dessert banana): 135582933
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Entry
135582933 CDS
T03447
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135582933
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135582933
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
135582933
NCBI-ProteinID:
XP_064959529
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Position
BXJ2-4:7538431..7545275
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AA seq
463 aa
AA seq
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MAPGQGTQQQFRYTQTPSKVLHVRNLPWDSAEEELVALCRPFGKIVNTMCNVGANKNQAF
VEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKSTGDVPGNVLLVTIEG
VESGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAETAASARNALDGRSIPRY
LLLEHITTCHLRITYSAHTDLSIKFQSHRSRDYTNPFLPVNPSAIEGSVQPLLGPDGVKK
ETESNVLLASIENMQYAVTVDVLHTVFSTFGTVQKIAIFEKNGGMQALIQYPDVTTASIA
KEALEGHCIYDGGYCKLHLTYSRHTDLSVKVHNDRGRDYTVQDTGVLMTSQAPSLPTTTG
WQVHPQSTTTYIGNDFTATGQVTVPHGQVTTWNPSLSSGSFASASNMFPSQTFATPVSHY
PVSTTSSAPSALLQASQESSQYGLLANAQPAAAPTTQPPYYTT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggggcagggaacgcagcagcagttccggtatacgcagacgccatcgaaggtg
ctgcacgtccggaacctgccgtgggacagcgccgaggaggagctcgtcgccctgtgcagg
ccattcggcaagatcgtcaacaccatgtgcaacgtcggcgccaacaagaaccaggccttt
gtagaattcgctgatcttaaccaagcaatttcaatggtgtcatactatgcttcttcatct
gagcctgcccaagttcgtggaaaaactgtctatatccagtattctaataggcaagaaatt
acgaataacaagagtactggagatgttcctgggaatgtcttgctggtcactattgaaggt
gttgaatctggggatgtcagcattgatgtgattcatttggtgttctctgcttttgggttt
gtgcataaaattgcaacatttgaaaaagctgctggctttcaggcactaatccagtacaca
gatgcggagactgctgcaagtgcaagaaatgcattggacggaagaagcattcctaggtac
ttactacttgaacacattacaacttgccatttgcggatcacatattcggcccatacagat
ttaagtataaagttccagtcacatcgtagcagggactacacaaatccctttcttcctgtg
aacccttcagcaattgagggttctgtacagccactgcttggtcctgatggagtgaaaaag
gagactgaaagtaatgtccttttggcttccatagagaatatgcaatatgctgtgacagtt
gatgttctacatacagtcttctccacctttggaactgtgcagaagattgcaatttttgag
aaaaatggtggcatgcaggcattgatacaatatcctgatgtgacaactgcttcaattgcc
aaggaagctttggagggacactgcatttatgatggtggttattgtaagcttcatttgaca
tattctcgtcatactgatctcagtgttaaggtgcataatgatagaggcagagactacact
gttcaggacactggtgtactaatgacgtcccaagctcctagtttgccgaccactactggt
tggcaagttcatcctcaatctacaaccacatatattggcaatgatttcacagctacagga
caagtgacagttccgcatggccaagtgacgacatggaatcctagcttgtcaagtggaagc
tttgcctcagcttctaacatgttccccagtcagacatttgcaacacctgtttcccattac
ccagtttcaaccacttccagtgctccttctgcgctgcttcaagcttcacaggagtcatct
caatatggtcttctggcaaatgcacagcctgctgctgcaccaaccacccagcctccatac
tacactacataa
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