Musa acuminata (dessert banana): 135583216
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Entry
135583216 CDS
T03447
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135583216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135583216
Spliceosome [BR:
mus03041
]
Common components
Common spliceosomal components
SR proteins
135583216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
SET_assoc
Nup35_RRM_2
DUF2129
RBD_RDR6
Cucumo_2B
Motif
Other DBs
NCBI-GeneID:
135583216
NCBI-ProteinID:
XP_064955100
LinkDB
All DBs
Position
BXJ2-3:9624693..9629503
Genome browser
AA seq
272 aa
AA seq
DB search
MKNSRNNGFELIRVDLAFTCSYKMRPIFCGNFEYDARQSELERLFSRYGKVDRVDMKSGF
AFIYMDDERDAEDAIRALDRTEFGRQGRRLRVEWTKQERGGRSASSRRSPSNMRPTKTLF
VINFDPINTRMRDLERHFEPYGKISNVRIRRNFAFIHFELQEDATKALEATNMSKLMDRV
ISVEYALRDDDDKRNGYSPDRRGRERSLERRGRDTRRSPSPYGRGRERDSPDYGRGPSPY
NKPEQRGSPNYGRDGSPGYERYPSQSPRQEEQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagtagaaacaacggattcgaactgatacgtgtggatttagcttttacttgt
tcatacaaaatgaggcccattttctgtgggaacttcgaatatgatgctcgccaatctgaa
ttggaacggcttttcagcagatatgggaaggttgacagggtagatatgaaatcaggattt
gctttcatttacatggatgatgaaagagatgcagaggatgcaattcgggcccttgacaga
actgagtttggcagacaggggcgacggcttcgtgttgagtggacaaagcaagagcgtggt
ggtagatctgccagttcaagaaggtctccttctaacatgaggcccacaaagactttgttt
gtcataaactttgatccaatcaataccagaatgagagacttggagaggcactttgaaccg
tatggaaaaatctcaaatgttaggatcagaagaaactttgcatttattcactttgagttg
caggaggatgccactaaagcattggaggcaacaaatatgagcaaattaatggatcgggtc
atttcggtggagtatgcacttcgtgacgatgatgacaaaagaaatgggtacagccctgac
aggagaggcagggagagatccctggaaaggagaggccgtgacacacggcgttctccaagc
ccatatggcagaggcagggagagggacagtcctgattatgggcgtggtccgagtccatat
aacaaacccgagcaaaggggtagtcctaattacggaagagatggaagtccagggtatgag
aggtaccccagtcaatctccaaggcaggaagaacaatga
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