Musa acuminata (dessert banana): 135583415
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Entry
135583415 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135583415 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135583415
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135583415
Surveillance factors
Other surveillance factors
135583415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
135583415
NCBI-ProteinID:
XP_064949829
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All DBs
Position
BXJ2-1:complement(19497107..19531823)
Genome browser
AA seq
1640 aa
AA seq
DB search
MASDNVDLPEDLLYTKSSEEAWAGNDSLAGKGSDEKNPLIGFLDAVKDQVTSENSIPLSP
QWLYAKASDSKDTRPPNSASSGTLPDIIQKDMWRLDGSQDKKEWIRNASDVDFSRRWREE
ERETSLLGRKERKKEGDRETEYRKSDRRPDNILLRESADSRSSPSSDKFYEVPNRGTGNE
NRRDSKWSSRWGPEDKENEMRTEKKVDAEKEDSHVEKQFFIASFRPLSGSDSRDKWRPRH
RQDVYSGGSSVIRAAPGFGLERVSTEDSNVGFARGRGRSDSVTGLQFGRSSAAGPIGATP
VNKAEFRYPRGKLLDIYRKQKMTVIDATPVRFVEVPPITESSFVTPLAFVIPDAEEEVLL
KDIWKGKVMSSEASSSWERMARDNKIGIGDGDKTLIEKKHARRGPFTNSEELNSDHEERK
AVNTMINLVGFNGLTKKIADHEVFHDKPVSVSNITNSQINDGQIEVVNVDDESSHVDILK
DIKLEGQDLTVSDFNAKLPDESYPLFDSSFVEAIPRINKLKSSKAEMNLSEQGTPEELSL
FYMDPQGDIQGPFLGADIISWFEQGFFGTDLPVCLSDAPDGTPFQPLGEVMPHLKLEFHS
GPDICSGEKSEPLDATRSDLESCIPSSHDTGGSSTTNNQRRALSWDSLDHHGKHDVPENE
AFTDPNKNSLSFPSSGTPPGATGGHIFHDLTGRDAEVVLYKGRSMSDMGKQSGKFANDHI
ALSRSPNNHHYMVPEAGNTSFASEHIPRENNLDPFGLLWSELEGTQQKLPLSSNIAGSAE
NLIGNCDSSRNSFPFGLNQTQFNLISDFPIANNSLSKNYRRSNSLNIIPDMFDANNMSQI
EAESSHFGLEQRLLFQQLQMKELQQQCLLAHQNAEFSGTLLDQVHGPMHQHHHVHQQPVE
DLERMLKFQFEQLRHLDMLQQQHQLRQQQTQLHEHQIQLLQHRLHHEPQPQQSQQQMYLE
RLLHRQLLEAGFGTSNIDPHGINMFDQVRFRQQLLKESQQSHNLSLHHDSAIDQHIQANL
GLNIQRQSHNGLLDILSHSSQRQVPPIEQQFLLGLQLDQLQAQLSSPASTKLSAMEEERH
IGGVWSVGESGQFIRTALGPHQDFSARSSQSEFMQAAKGPLFEQRSHVQPNILFHERMQR
GPYEQGSHPIDRLHMHAGTPGPNLELINALARVQGLDAHEHLNHLHTSGEVGQLPSSVHS
HQNQIANDLTGASMDVSERHWFEPNRQLSADLMESHLKHLPIEAEKKRGISISHSVKDPN
VWASFVGNDGSSGHELRDLLHQEMLLQSQQPLGVYSTPSSNEHGDSSWLYSQHGPEHSFN
LDMDRVGLSGSMSEGSLFSEVRQPRNEQLINKNLEGSANDIESSRRPSLRSGSATLIEQK
HFLSDTDYIEREKFVTSLGDASLQSFDFYNLKEVENRKMQGLKGSSRTQSALNMQDSGVM
QAIGGGHEEVNVDKLFRHDLSSKAARGLSFYNYETGTDNAHIEGMGNNMISGDISKGDDN
SFLAATCDPHSTSSIAGSDLASKQSAKAKNPTNGSSEGGCLNFGGNSTSHVSETSMSNKK
DLRFRRTSSSSDADVAEPSFSDMLKSTKKTMPDPESLEVVSSGKSAKKKGKKGRQIDPSL
LGFKVHSNRILMGEIQRPDD
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacaacgtggatctgccggaggatctcctctacacgaagtcgtccgaggag
gcctgggcaggcaacgattctctcgctggtaaaggtagtgatgaaaagaatcctctcata
ggttttcttgatgcagtaaaagatcaagtgacttctgaaaatagtattccactctcgccc
caatggctctatgccaaggctagtgacagcaaggatacccgcccaccaaattcagcatct
tctggaaccttgcctgatattattcagaaagatatgtggcgtctggatggatcccaggat
aagaaagaatggataagaaatgcaagtgatgtagattttagccgccgttggcgtgaagag
gagagagaaactagcttgcttggtaggaaagaacgtaaaaaggaaggagatcgagaaacc
gagtaccgaaaaagtgaccgccgtcctgacaatatcctgttgagagaatctgctgattct
aggagttcaccttcatctgacaagttttatgaagttcctaatcgtggtacagggaatgaa
aatcgccgtgacagcaagtggtcatctaggtggggtcccgaggacaaagagaatgaaatg
cggacagaaaagaaagtggatgcagaaaaagaagattctcacgttgagaaacagtttttt
attgccagcttccgccccttatctggatctgattctcgtgataagtggaggccacgccat
cgtcaggatgtttattccggtgggtcatcagtgattcgtgctgctcctggatttgggttg
gaaagagtttccacggaggattcaaatgtgggttttgctcgtggtaggggtagatcagac
tctgttacaggattgcaatttggcaggtcatctgctgctggccctattggtgcaactcca
gtaaataaagcggagttccggtatcccaggggtaaactactagatatttataggaagcag
aagatgacagtcattgatgctactcctgtgagatttgtagaagttcctccgataacagaa
tctagctttgtgactcctttggcctttgtcatacctgatgctgaggaagaggttcttctg
aaagatatttggaaggggaaagtcatgagcagtgaagcaagttcaagttgggaaaggatg
gcaagggataataaaattgggataggtgatggagacaaaaccctgattgagaagaaacat
gctagaaggggaccttttacaaattctgaagagttgaattctgaccatgaagaacgaaag
gctgtcaacactatgattaatttggtgggttttaatggtttgactaaaaaaattgcagat
catgaggtttttcatgataaaccagtttcagtcagcaatattactaattcccagataaat
gatggtcagattgaagtagtaaatgttgatgatgaatcaagtcatgtggatattctaaaa
gatatcaagttagaaggacaggatttaactgtctctgattttaatgctaagctacccgat
gagtcataccctttatttgattcatcttttgttgaagcgattccaagaatcaacaaactt
aaaagcagcaaagctgagatgaatctttcagaacagggcactcctgaggagttgagttta
ttttacatggatccccaaggagacatacagggcccatttctcggtgctgatatcatctca
tggtttgaacaaggtttctttggtacagatttacctgtgtgcttatcagatgctcctgat
ggcacaccttttcagccacttggtgaagtaatgcctcacttgaaactggagttccattct
ggccctgatatctgttctggcgaaaagtccgaacctttggatgctacaaggagtgacctg
gagtcttgtatcccttcttcccatgatactggtggttcttccaccacaaacaatcaaaga
agggcgctatcatgggattctctggatcatcatggaaaacatgatgttcctgaaaatgaa
gctttcacagatcccaacaaaaacagtttatctttccctagctcagggaccccaccaggt
gcaactggtggacacatctttcatgatcttactgggcgagatgcagaagttgtattgtac
aaaggtaggtccatgagtgacatggggaaacaatcaggaaaatttgctaatgaccacatt
gctctatcaaggtcccctaataatcatcactatatggtgccagaggctggaaatactagt
tttgccagtgagcacattccaagagagaataatttggatccttttggattattgtggtct
gagctagaaggaactcaacagaagcttcccctttcatcaaatattgcagggtctgctgag
aatttgattggcaactgtgattcttcaagaaattcctttccatttggcctcaatcagacg
cagttcaatttgatcagtgacttccctattgccaacaattcattgtccaaaaactataga
aggagcaatagtttaaatataattcctgatatgtttgatgcaaataacatgtcacagatt
gaagctgagtcaagccactttggcttagaacagcgcctactcttccaacaattacagatg
aaagaacttcagcagcaatgtttactggcccatcaaaatgctgagttcagtggtacactt
ttggaccaggtgcatggacctatgcaccaacatcaccatgttcatcaacaacctgtggag
gatctagagcgtatgttgaaatttcagtttgagcagctgcgacatcttgatatgttgcag
cagcaacatcaactgcgtcagcaacagacacaactgcatgagcatcagattcaattgtta
caacatcgtcttcatcatgaaccgcaaccacaacaatcccagcagcagatgtatcttgaa
cgtctgctgcatcggcaattacttgaagctggttttggaacatccaacattgatcctcat
gggataaacatgtttgatcaggttcgctttagacagcagctcttgaaagagtcacaacag
tctcacaacctttcactgcatcatgactcagctatagatcaacatatccaagcaaactta
gggctgaatattcaacggcagagtcataatggtttattggatattctatcccattccagt
cagaggcaggtgcctcctatagaacaacaatttcttttagggcttcagctggaccagctt
caggcacaactgtcgtcccctgcttctaccaagctgtctgcaatggaagaagagagacac
atagggggggtttggtcagttggtgaatctggtcagtttatcaggactgcacttggtcca
caccaggatttttctgccagatctagccaatcagagtttatgcaggcagcaaagggacca
ttgtttgagcagcgcagtcatgttcaaccaaacattttgtttcatgagagaatgcaacga
gggccttatgaacaagggtcacatcctattgacaggctacatatgcatgcaggtactcct
ggtccgaacttggaactcattaatgccttagcacgagtacaaggactggatgcacatgag
catcttaatcatctgcatacttctggtgaggtaggacagcttccttctagtgtacactct
catcagaatcagattgctaatgatttaactggtgcaagcatggatgtgagtgagaggcac
tggtttgaaccaaataggcagctctcagctgatttaatggaatcccatttgaagcacttg
ccaatagaagcagaaaagaagaggggcattagcataagtcactctgttaaggacccaaat
gtatgggcatcatttgtaggaaatgatggaagttcaggacatgaattgagagacttgctc
catcaagaaatgcttctccaatctcaacagccactaggagtatatagcactccatcttcc
aatgagcatggggactcttcttggctctattctcagcatggtccagagcattcctttaat
cttgacatggatagagtgggacttagtggttctatgtctgagggttctcttttttctgaa
gtaagacagccacgaaacgagcaactgatcaacaaaaatctggaaggtagtgctaatgac
attgagagcagtagaaggcccagtttgagatctggttctgcaacattaattgaacagaaa
cattttctttcagatacggattatattgaaagagagaaatttgtgacttctttgggtgat
gcttccttgcaatcatttgatttctacaatttaaaggaggtggaaaataggaagatgcag
ggtctaaagggcagttccaggactcaatcagcattgaacatgcaggacagtggggttatg
caagcaataggtggaggtcatgaggaggttaatgttgacaaactttttaggcatgattta
tctagcaaggctgccagaggtttgagcttctacaattatgaaacagggactgataacgct
catattgaagggatgggtaataacatgatttctggtgatatctcgaaaggagatgacaat
tcattcttagcagctacttgtgatcctcattctacctcatctatagcaggatctgacctg
gcctcaaagcaatctgcaaaggcaaagaatcctactaatggatcttctgagggaggatgt
ctcaactttggaggtaattctacatcccatgtctcagagacatcgatgtctaacaagaaa
gacttgagatttcgtcgaacctcttcgagcagcgatgcagatgttgcagaaccttcattc
agtgatatgctgaagagtaccaaaaagaccatgcctgatcccgagtctctagaagttgtc
tcatctggtaagagtgccaaaaagaaaggaaagaagggcagacagattgatccgtcactt
cttggtttcaaagtccatagcaaccgcatattgatgggtgagatccagcggccagatgat
tga
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integrated database retrieval system
